RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 TMEM107Q6UX40 140 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ABHD13Q7L211 337 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 SYT13Q7L8C5 426 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 PRSS48Q7RTY5 328 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 RBM12BQ8IXT5 1001 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 NUP43Q8NFH3 380 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 OR9Q2Q8NGE9 314 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 FAM81AQ8TBF8 368 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 FAR1Q8WVX9 515 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 RORBQ92753 470 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ELP4Q96EB1 424 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ZFYVE21Q9BQ24 234 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 BCL7BQ9BQE9 202 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 RASSF1Q9NS23 344 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 GPR27Q9NS67 375 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 WSB2Q9NYS7 404 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 WARS2Q9UGM6 360 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ACAD8Q9UKU7 415 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 MGAT4BQ9UQ53 548 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 LIPT1Q9Y234 373 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 SLC9A8Q9Y2E8 581 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 PCDHGA10Q9Y5H3 936 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 XIRP2A4UGR9 3374 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 BRWD1Q9NSI6 2320 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 A0A0J9YVX5 310 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 A0A0J9YY10 115 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 SPTY2D1-AS1A0A0U1RR47 76 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 CHURC1-FNTBB4DL54 471 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 FAAHO00519 579 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 FFAR1O14842 300 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 CASC3O15234 703 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 CTSVO60911 334 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ADAP00813 363 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 C8orf89P0DMQ9 161 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 DUSP2Q05923 314 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 EIF2B5Q13144 721 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ZNF750Q32MQ0 723 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 MANEAQ5SRI9 462 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 DCST1Q5T197 706 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 TCTN3Q6NUS6 607 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 AQP11Q8NBQ7 271 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 RHOXF1Q8NHV9 184 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 APH1BQ8WW43 257 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 RERGQ96A58 199 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 C10orf90Q96M02 699 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 FCRL4Q96PJ5 515 aa17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 PHF7Q9BWX1 381 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 NAA50Q9GZZ1 169 aaKnown RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 NMNAT1Q9HAN9 279 aaPredicted RBP17.23■□□□□ 0.35
PDLIM7-203ENST00000359895 ZSCAN9O15535 394 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 THEGLP0DJG4 465 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 ALPPL2P10696 532 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 CTSEP14091 401 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 CD6P30203 668 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 BLKP51451 505 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 ZNF770Q6IQ21 691 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 DEF8Q6ZN54 512 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 TAF8Q7Z7C8 310 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 LRRC25Q8N386 305 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 LINC00471Q8N535 108 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 OR4K14Q8NGD5 310 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 BAHD1Q8TBE0 780 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 NR4A3Q92570 626 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 DTNBP1Q96EV8 351 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 PINK1Q9BXM7 581 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 DGCR6LQ9BY27 220 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 LYRM4Q9HD34 91 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 KCMF1Q9P0J7 381 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 NTMQ9P121 344 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 RHCGQ9UBD6 479 aa17.22■□□□□ 0.35
PDLIM7-203ENST00000359895 DUXAA6NLW8 204 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 P2RX6O15547 441 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 MPZL2O60487 215 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 AGR2O95994 175 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 MT-ND2P03891 347 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 ELAVL4P26378 380 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 MC3RP41968 323 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 GP2P55259 537 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 CDC42P60953 191 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 FZD2Q14332 565 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 SMN1Q16637 294 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 GPAT3Q53EU6 434 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 FGD3Q5JSP0 725 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 ATAD3BQ5T9A4 648 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 Q6ZS52 159 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 RNF44Q7L0R7 432 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 ANKRD13BQ86YJ7 626 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 OR9A2Q8NGT5 310 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 VANGL1Q8TAA9 524 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 ZCCHC10Q8TBK6 192 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 MYDGFQ969H8 173 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 OR7D2Q96RA2 312 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 YIPF4Q9BSR8 244 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 DCUN1D5Q9BTE7 237 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 GPR174Q9BXC1 333 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 ACTRT3Q9BYD9 372 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 TRIM45Q9H8W5 580 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 IMPAD1Q9NX62 359 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 AASSQ9UDR5 926 aa17.21■□□□□ 0.35
PDLIM7-203ENST00000359895 SPACA6W5XKT8 324 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms