RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RPS15AP62244 130 aaKnown RBP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ACTA2P62736 377 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ACTG2P63267 376 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 FCRLBQ6BAA4 426 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ZBTB20Q9HC78 741 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 SCAMP2O15127 329 aaKnown RBP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 IFNA1P01562 189 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 JUNDP17535 347 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 MAP2K3P46734 347 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 TMBIM6P55061 237 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 HNRNPKP61978 463 aaKnown RBP eCLIP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 GARNL3Q5VVW2 1013 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 AWAT2Q6E213 333 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ENPP6Q6UWR7 440 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 TSNAXQ99598 290 aaKnown RBP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF175Q9Y473 711 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 C2orf78A6NCI8 922 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ANHXE9PGG2 379 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ERCC1P07992 297 aaPredicted RBP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 CATSPEREQ5SY80 951 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 GPR137CQ8N3F9 429 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ZFAND2BQ8WV99 257 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 MAFKO60675 156 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 EEDO75530 441 aaKnown RBP17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF33AQ06730 810 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 UNC50Q53HI1 259 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF559Q9BR84 538 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 MYOM1P52179 1685 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 DIRAS3O95661 229 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 SLC2A5P22732 501 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 PYCR1P32322 319 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 ZNF616Q08AN1 781 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 SHFQ7M4L6 423 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 BEST3Q8N1M1 668 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 SSX3Q99909 188 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 TXNRD2Q9NNW7 524 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 SIX4Q9UIU6 781 aa17.55■□□□□ 0.4
SHANK1-202ENST00000359082 CASP6P55212 293 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 NPY5RQ15761 445 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 RAB11BQ15907 218 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.54■□□□□ 0.4
SHANK1-202ENST00000359082 BAIAP2L2Q6UXY1 529 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 C6orf120Q7Z4R8 191 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 PEX11GQ96HA9 241 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 HINT2Q9BX68 163 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 UNCXA6NJT0 531 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 C12orf71A8MTZ7 269 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 CTC1Q2NKJ3 1217 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
SHANK1-202ENST00000359082 ARHGAP12Q8IWW6 846 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 OR2B3O76000 313 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 CRISP1P54107 249 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 NXPE4Q6UWF7 544 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 DPY19L3Q6ZPD9 716 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 TRIM46Q7Z4K8 759 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 DAZLQ92904 295 aaKnown RBP17.54■□□□□ 0.4
SHANK1-202ENST00000359082 DDIT4LQ96D03 193 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 H3BUI4 141 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 KANK2Q63ZY3 851 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 GLYATL2Q8WU03 294 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 DPH7Q9BTV6 452 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 RNF215Q9Y6U7 377 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 PIRO00625 290 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 RFPL1O75677 317 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 HPRP00739 348 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 IGSF21Q96ID5 467 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 PLEKHA3Q9HB20 300 aa17.54■□□□□ 0.4
SHANK1-202ENST00000359082 JUPP14923 745 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 FECHP22830 423 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 OTX2P32243 289 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 NIPAL4Q0D2K0 466 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 INCA1Q0VD86 236 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 PSAPL1Q6NUJ1 521 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 LIX1LQ8IVB5 337 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 C12orf76Q8N812 135 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 HDHD5Q9BXW7 423 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 TMEM59LQ9UK28 342 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 A0A1W2PQU0 124 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SDHDO14521 159 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 GRIA2P42262 883 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 RAB28P51157 221 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 ALDH16A1Q8IZ83 802 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 ADAMTS6Q9UKP5 1117 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 RHCEP18577 417 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 HTR1EP28566 365 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 KRBOX4Q5JUW0 171 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 SFRP4Q6FHJ7 346 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-202ENST00000359082 FAM217AQ8IXS0 508 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 EDARQ9UNE0 448 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 TNFSF12O43508 249 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 HTR2AP28223 471 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 RAB4BP61018 213 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 UGT3A2Q3SY77 523 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 GPRIN1Q7Z2K8 1008 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 RCBTB1Q8NDN9 531 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 TOR1AIP2Q8NFQ8 470 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 OR8K5Q8NH50 307 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 TRIB3Q96RU7 358 aa17.53■□□□□ 0.4
SHANK1-202ENST00000359082 MVB12BQ9H7P6 319 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms