RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 ABTB1Q969K4 478 aaPredicted RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 GFM2Q969S9 779 aaKnown RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 AMDHD1Q96NU7 426 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CTAGE1Q96RT6 745 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 OVOL2Q9BRP0 275 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 PIMREGQ9BSJ6 248 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 APOL6Q9BWW8 343 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 MCOLN1Q9GZU1 580 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC5A7Q9GZV3 580 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 SMPXQ9UHP9 88 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 MTUS1Q9ULD2 1270 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 DIMT1Q9UNQ2 313 aaKnown RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC4A4Q9Y6R1 1079 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 NPIPB6E9PJ23 425 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZNF195O14628 629 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 RAD51BO15315 384 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CPNE6O95741 557 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZNF17P17021 662 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 HSPA1LP34931 641 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 VHLP40337 213 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 MFAP4P55083 255 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 F2RL1P55085 397 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CDH6P55285 790 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CACNG1Q06432 222 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 EGR3Q06889 387 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 BAMBIQ13145 260 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 PTK6Q13882 451 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 DOC2BQ14184 412 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 IL13RA2Q14627 380 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CASP8Q14790 479 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZNF124Q15973 351 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 AP5B1Q2VPB7 878 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 FGD3Q5JSP0 725 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CTSL3PQ5NE16 218 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 DNLZQ5SXM8 178 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 LINC00242Q5T6M2 205 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 C18orf63Q68DL7 685 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CEP128Q6ZU80 1094 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 TCF24Q7RTU0 167 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 C17orf82Q86X59 251 aaPredicted RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 ARHGEF19Q8IW93 802 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 ITPRIPQ8IWB1 547 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 FGFRL1Q8N441 504 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 STARD8Q92502 1023 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 TMEM80Q96HE8 168 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 RPL10LQ96L21 214 aaKnown RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 SHARPINQ9H0F6 387 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 GLIPR2Q9H4G4 154 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 VPS37BQ9H9H4 285 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC28A3Q9HAS3 691 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 GOLGA2P5Q9HBQ8 144 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 RANGRFQ9HD47 186 aaPredicted RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 RAD18Q9NS91 495 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 SEPT10Q9P0V9 454 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 DDX19BQ9UMR2 479 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 KCNJ14Q9UNX9 436 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 LSM4Q9Y4Z0 139 aaKnown RBP1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 CELSR1Q9NYQ6 3014 aa1.66□□□□□ -2.14
SMARCAD1-202ENST00000359052 FAM220BPB1ANY3 271 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 E9PI62 339 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 ABCD4O14678 606 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 IMPA2O14732 288 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 SLC28A2O43868 658 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 CCNT2O60583 730 aaKnown RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 KLHL2O95198 593 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 FGFR1OPO95684 399 aaKnown RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 ALOX5P09917 674 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 OR2T7P0C7T2 308 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 DRD1P21728 446 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 CFL1P23528 166 aaKnown RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 ARL3P36405 182 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 MMP13P45452 471 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 TMEM33P57088 247 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 LRMPQ12912 555 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 KLRB1Q12918 225 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 SIX1Q15475 284 aaPredicted RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 IMMTQ16891 758 aaKnown RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 FAM98BQ52LJ0 330 aaKnown RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 HIKESHIQ53FT3 197 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 RABGAP1LQ5R372 815 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 ETV3LQ6ZN32 361 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 DNM1P46Q6ZS02 220 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 KLHDC8BQ8IXV7 354 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 LINC00518Q8N0U6 118 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 TTC5Q8N0Z6 440 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 ELMOD1Q8N336 334 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 FAR1Q8WVX9 515 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 SYTL4Q96C24 671 aaPredicted RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 ZG16BQ96DA0 208 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 HSFY1Q96LI6 401 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 COQ7Q99807 217 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 CBWD1Q9BRT8 395 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 MTG1Q9BT17 334 aaPredicted RBP1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 MROQ9BYG7 248 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 GSTO2Q9H4Y5 243 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 RNF122Q9H9V4 155 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 CSNK1G1Q9HCP0 422 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 AKIP1Q9NQ31 210 aa1.65□□□□□ -2.14
SMARCAD1-202ENST00000359052 SIX4Q9UIU6 781 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms