RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MID1IP1Q9NPA3 183 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 EXOSC4Q9NPD3 245 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 GPR83Q9NYM4 423 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SPASTQ9UBP0 616 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MLXQ9UH92 298 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 KIF25Q9UIL4 384 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF222Q9UK12 451 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SPATA2Q9UM82 520 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ZFR2Q9UPR6 939 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PCDHB11Q9Y5F2 797 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 CHD6Q8TD26 2715 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 LOC102723532A0A0G2JNH3 316 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 TCRBV16S1A1N1A0A5B0 115 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SYNDIG1LA6NDD5 238 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MYO1GB0I1T2 1018 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 KCNK1O00180 336 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PRRG1O14668 218 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 INSIG1O15503 277 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 LYRM1O43325 122 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SGCEO43556 437 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PSIP1O75475 530 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 STC2O76061 302 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 GLP2RO95838 553 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PEX11BO96011 259 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 IGLV1-40P01703 118 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ESR1P03372 595 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 HRGP04196 525 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 CNPP09543 421 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MPC1LP0DKB6 136 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PRKAR1AP10644 381 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SLC2A2P11168 524 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 HLA-EP13747 358 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 HLA-FP30511 346 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 TNFRSF4P43489 277 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 RAB13P51153 203 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 HK3P52790 923 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 NUDT6P53370 316 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MXD1Q05195 221 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 DLX2Q07687 328 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ST3GAL4Q11206 333 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 NPRL3Q12980 569 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 CAMK1Q14012 370 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 TSC22D1Q15714 1073 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 UNC50Q53HI1 259 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 RUNDC3AQ59EK9 446 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 RTP2Q5QGT7 225 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SYPL2Q5VXT5 272 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 LRRC66Q68CR7 880 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 FCRLBQ6BAA4 426 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 C5orf46Q6UWT4 87 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 USP45Q70EL2 814 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 EIF3MQ7L2H7 374 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 KANSL1Q7Z3B3 1105 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 FAM131BQ86XD5 332 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SLC44A2Q8IWA5 706 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SLC34A3Q8N130 599 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 STX19Q8N4C7 294 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 DNAJC22Q8N4W6 341 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 DPP10Q8N608 796 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF655Q8N720 491 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF565Q8N9K5 539 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 FBXO15Q8NCQ5 510 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ATP6V1C2Q8NEY4 427 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 OR10A6Q8NH74 314 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 WDR36Q8NI36 951 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 KIAA1191Q96A73 305 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 L3HYPDHQ96EM0 354 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF514Q96K75 400 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 EXOC2Q96KP1 924 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 COQ10AQ96MF6 247 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 COL21A1Q96P44 957 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 OR5M11Q96RB7 305 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 DPYSL5Q9BPU6 564 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 DPH7Q9BTV6 452 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 FSD1LQ9BXM9 530 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 GPR62Q9BZJ7 368 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MED28Q9H204 178 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MIXL1Q9H2W2 232 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 TFB2MQ9H5Q4 396 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 RDH14Q9HBH5 336 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 KRT84Q9NSB2 600 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PLCXD1Q9NUJ7 323 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 DCAF13Q9NV06 445 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 AIG1Q9NVV5 245 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ZNF490Q9ULM2 529 aaPredicted RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PCDHB9Q9Y5E1 797 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 PCDHGA6Q9Y5G7 932 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 SLC22A7Q9Y694 548 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 MRPL42Q9Y6G3 142 aaKnown RBP3.79□□□□□ -1.8
CNGA1-201ENST00000358519 ATG2AQ2TAZ0 1938 aa3.79□□□□□ -1.8
CNGA1-201ENST00000358519 IQCMA0A1B0GVH7 501 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 FAM234BA2RU67 622 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 FAM74A7A6NL05 159 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 AGAP14A8MT82 685 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 CXCR6O00574 342 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 AKAP8O43823 692 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 EIF1BO60739 113 aaKnown RBP3.78□□□□□ -1.8
CNGA1-201ENST00000358519 ECI2O75521 394 aa3.78□□□□□ -1.8
CNGA1-201ENST00000358519 BEST1O76090 585 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms