RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 VNN3Q9NY84 501 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SARDHQ9UL12 918 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 DHDHQ9UQ10 334 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ADAMTS3O15072 1205 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 NR2C1P13056 603 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 BMP1P13497 986 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 NAT1P18440 290 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 IDSP22304 550 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ACVR1BP36896 505 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 BTG3Q14201 252 aaPredicted RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 UBE2NLQ5JXB2 153 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC8B1Q6J4K2 584 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SORCS1Q8WY21 1168 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM125Q96AQ2 219 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 FCRL1Q96LA6 429 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PELOQ9BRX2 385 aaKnown RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC28A3Q9HAS3 691 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 KCNJ16Q9NPI9 418 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 CNOT2Q9NZN8 540 aaKnown RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 AP1M2Q9Y6Q5 423 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PDHXO00330 501 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SCDO00767 359 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SEC14L2O76054 403 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ALPLP05186 524 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 BEX3Q00994 111 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF33BQ06732 778 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 MICAQ29983 383 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 UNC50Q53HI1 259 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 AMZ2Q86W34 360 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC7A13Q8TCU3 470 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 GIMAP5Q96F15 307 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 GORASP2Q9H8Y8 452 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 MYBPHLA2RUH7 354 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 UNC119BA6NIH7 251 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PDYNP01213 254 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 FUCA1P04066 466 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 PPP3CBP16298 524 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 DLX5P56178 289 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SH3BP2P78314 561 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ZDHHC14Q8IZN3 488 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 LMO3Q8TAP4 145 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 RBFOX1Q9NWB1 397 aaKnown RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 FCF1Q9Y324 198 aaKnown RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 DLEC1Q9Y238 1755 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 OR7A17O14581 309 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SDC3O75056 442 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 IFNA5P01569 189 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 AFF3P51826 1226 aaKnown RBP8.39□□□□□ -1.07
COL6A6-201ENST00000358511 RAB11BQ15907 218 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 AVPI1Q5T686 147 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ARHGAP11AQ6P4F7 1023 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC35F5Q8WV83 523 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 LCN9Q8WX39 176 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 RTP4Q96DX8 246 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SLC41A3Q96GZ6 507 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SYN3O14994 580 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 DPP6P42658 865 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 SSX9Q7RTT3 188 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 ORAI3Q9BRQ5 295 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 EMC7Q9NPA0 242 aa8.39□□□□□ -1.07
COL6A6-201ENST00000358511 AKR1C4P17516 323 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 AMY2BP19961 511 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CADM3Q8N126 398 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DCUN1D4Q92564 292 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 OLAHQ9NV23 265 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 NAALAD2Q9Y3Q0 740 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 NOX1Q9Y5S8 564 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ARAP2Q8WZ64 1704 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 MITFO75030 526 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 PDGFAP04085 211 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ATP1B2P14415 290 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 UGT2B7P16662 529 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DCTP40126 519 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 TAS1R3Q7RTX0 852 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 LACC1Q8IV20 430 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CCDC71Q8IV32 467 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 MAPK15Q8TD08 544 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 SLC5A11Q8WWX8 675 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 HIST1H2AAQ96QV6 131 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DPH2Q9BQC3 489 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ADARB2Q9NS39 739 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 WRAP73Q9P2S5 460 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 FAM230AA0A1W2PPH8 454 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 A0A1W2PPK0 400 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ANKRD33BA6NCL7 494 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 WTIPA6NIX2 430 aaPredicted RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 CXCR1P25024 350 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 TPMTP51580 245 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 ERVFC1P60507 584 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 SF3B4Q15427 424 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 TUBG2Q9NRH3 451 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 MRPL15Q9P015 296 aaKnown RBP8.38□□□□□ -1.07
COL6A6-201ENST00000358511 DLGAP4Q9Y2H0 992 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM14AQ9Y6G1 99 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 OR6C65A6NJZ3 312 aa8.38□□□□□ -1.07
COL6A6-201ENST00000358511 MSCO60682 206 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms