RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 GABRR3A8MPY1 467 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 SNNO75324 88 aaPredicted RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 SNX4O95219 450 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 RASAL1O95294 804 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 DHRS4L1P0CG22 281 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 GMPRP36959 345 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 TRMT5Q32P41 509 aaKnown RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 LINC00696Q6ZRV3 163 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 CATSPER1Q8NEC5 780 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 RMND5BQ96G75 393 aaPredicted RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 GPR78Q96P69 363 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 C5AR2Q9P296 337 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 DOCK6Q96HP0 2047 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 A0A1W2PPV9 198 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 TTLL8A6PVC2 850 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 TLX3O43711 291 aaPredicted RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 LCMT2O60294 686 aaKnown RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 ITGB2P05107 769 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 CYP27C1Q4G0S4 372 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 GALNT18Q6P9A2 607 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 EIF3MQ7L2H7 374 aaKnown RBP8.62□□□□□ -1.03
UPF2-202ENST00000357604 HIPK4Q8NE63 616 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 OR1J4Q8NGS1 313 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 PHOSPHO1Q8TCT1 267 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 ZNF700Q9H0M5 742 aa8.62□□□□□ -1.03
UPF2-202ENST00000357604 A0A0A6YYD5 115 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 A0A0G2JPF8 293 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 SNTNA6NMZ2 147 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 HNRNPCL2B2RXH8 293 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 HNRNPCL3B7ZW38 293 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 CDC40O60508 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
UPF2-202ENST00000357604 STX11O75558 287 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 PGRP06401 933 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 HNRNPCL4P0DMR1 293 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 MAOAP21397 527 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 MSX1P28360 303 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 RBBP4Q09028 425 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ARTNQ5T4W7 220 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 DHFR2Q86XF0 187 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 CREB3L4Q8TEY5 395 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 KAT2AQ92830 837 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 PMM1Q92871 262 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 SGCZQ96LD1 299 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 UBL7Q96S82 380 aaPredicted RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 KCNS3Q9BQ31 491 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ING2Q9H160 280 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 OR51I1Q9H343 314 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 KLHL31Q9H511 634 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 FOLH1BQ9HBA9 442 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 FOXJ2Q9P0K8 574 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 DNAJC15Q9Y5T4 150 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ELOA3DA6NLF2 546 aaPredicted RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 CCT8L1PA6NM43 557 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 TOP3BO95985 862 aaKnown RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 FUCA1P04066 466 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 RGS8P57771 180 aaPredicted RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 PSME3P61289 254 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ELOA3BQ3SY89 546 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 COQ5Q5HYK3 327 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ELOA3Q8NG57 546 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 COL21A1Q96P44 957 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 SCN2BO60939 215 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 CBFA2T3O75081 653 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 PGGT1BP53609 377 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 KLF10Q13118 480 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ATP1A4Q13733 1029 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 C1DQ13901 141 aaKnown RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 OGFOD2Q6N063 350 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 RPS27LQ71UM5 84 aaKnown RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 ZNF619Q8N2I2 560 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 STACQ99469 402 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 WDR77Q9BQA1 342 aaPredicted RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 SARGQ9BW04 601 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 FOXO6A8MYZ6 492 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 TMEM233B4DJY2 109 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 CTSVO60911 334 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 UGT2B17O75795 530 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 SASH3O75995 380 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 DDAH2O95865 285 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 ZNF311Q5JNZ3 666 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 TMEM211Q6ICI0 200 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 B3GNT8Q7Z7M8 397 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 MRGPREQ86SM8 312 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 CADM2Q8N3J6 435 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 OR2T12Q8NG77 320 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 LMF1Q96S06 567 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 SORBS1Q9BX66 1292 aaKnown RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 H2AFY2Q9P0M6 372 aaPredicted RBP8.61□□□□□ -1.03
UPF2-202ENST00000357604 CTSFQ9UBX1 484 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 SLCO1B1Q9Y6L6 691 aa8.61□□□□□ -1.03
UPF2-202ENST00000357604 VSTM5A8MXK1 200 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 PLPP1O14494 284 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 GPR143P51810 404 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 WDR4P57081 412 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 EEF1A1P68104 462 aaKnown RBP8.6□□□□□ -1.03
UPF2-202ENST00000357604 FLOT2Q14254 428 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 EEF1A1P5Q5VTE0 462 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 OR52L1Q8NGH7 329 aa8.6□□□□□ -1.03
UPF2-202ENST00000357604 OSBPL11Q9BXB4 747 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms