RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TFP02787 698 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 GIFP27352 417 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 CNR2P34972 360 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TRHRP34981 398 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 DEFA6Q01524 100 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 SP4Q02446 784 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 LRRC74AQ0VAA2 488 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TAF1CQ15572 869 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 ZRANB3Q5FWF4 1079 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 MPZL3Q6UWV2 235 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 LAPTM4BQ86VI4 370 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 CDAN1Q8IWY9 1227 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TMEM192Q8IY95 271 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 LGI4Q8N135 537 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 LNX2Q8N448 690 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 GOT1L1Q8NHS2 421 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TPD52L3Q96J77 140 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 C12orf66Q96MD2 445 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 NPY6RQ99463 290 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 PFDN5Q99471 154 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 CACNG6Q9BXT2 260 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 ALX4Q9H161 411 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 IMP3Q9NV31 184 aaKnown RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 NLGN3Q9NZ94 848 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 PIPOXQ9P0Z9 390 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 FTSJ1Q9UET6 329 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 NEU3Q9UQ49 428 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 MEX3AA1L020 520 aaKnown RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 NCF1BA6NI72 391 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 NCF1CA8MVU1 366 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 ARHGEF33A8MVX0 844 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 DISC1C4P0D8 188 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 PRRG1O14668 218 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 GALR3O60755 368 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 KCNK5O95279 499 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 EGFP01133 1207 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 SLC6A4P31645 630 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 ZNF155Q12901 538 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 MAD2L1Q13257 205 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 SLC36A2Q495M3 483 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 KLHL26Q53HC5 615 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 SLC27A1Q6PCB7 646 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 BTN2A1Q7KYR7 527 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 SVBPQ8N300 66 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 WDSUB1Q8N9V3 476 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 FAM46DQ8NEK8 389 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 ESAMQ96AP7 390 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TSNAXQ99598 290 aaKnown RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 ZYG11BQ9C0D3 744 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 SLC25A32Q9H2D1 315 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 OSGEPL1Q9H4B0 414 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 CFAP97Q9P2B7 532 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 TRPS1Q9UHF7 1281 aa14.94□□□□□ -0.02
RTN3-205ENST00000356000 SPIN1Q9Y657 262 aaPredicted RBP14.94□□□□□ -0.02
RTN3-205ENST00000356000 GABRR3A8MPY1 467 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 ZNF593O00488 134 aaPredicted RBP14.93□□□□□ -0.02
RTN3-205ENST00000356000 NBNO60934 754 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 POMCP01189 267 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 MUC1P15941 1255 aaPredicted RBP14.93□□□□□ -0.02
RTN3-205ENST00000356000 IRS1P35568 1242 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 CDKN2CP42773 168 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 SRP9P49458 86 aaKnown RBP14.93□□□□□ -0.02
RTN3-205ENST00000356000 RGS4P49798 205 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 SPCS3P61009 180 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 ZNF33AQ06730 810 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 ABRAXAS2Q15018 415 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 C21orf62-AS1Q17RA5 79 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 DGKKQ5KSL6 1271 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 LYPD4Q6UWN0 246 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 PLEKHH3Q7Z736 793 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 CD99L2Q8TCZ2 262 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 PIH1D2Q8WWB5 315 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 TCEAL4Q96EI5 215 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 ZDHHC4Q9NPG8 344 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 EIF2B4Q9UI10 523 aaKnown RBP14.93□□□□□ -0.02
RTN3-205ENST00000356000 CA5BQ9Y2D0 317 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 M0QYT0 321 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 CXCL11O14625 94 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 SOD1P00441 154 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 ZDHHC11BP0C7U3 371 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 GJA5P36382 358 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 TSPAN7P41732 249 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 SNRPGP62308 76 aaKnown RBP14.93□□□□□ -0.02
RTN3-205ENST00000356000 ILKQ13418 452 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 PON3Q15166 354 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 C9orf152Q5JTZ5 239 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 TMEM201Q5SNT2 666 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 ZNF660Q6AZW8 331 aaPredicted RBP14.93□□□□□ -0.02
RTN3-205ENST00000356000 TMUB2Q71RG4 321 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 SERPINA12Q8IW75 414 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 SKA3Q8IX90 412 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 NR4A3Q92570 626 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 HHIPQ96QV1 700 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 CYSLTR2Q9NS75 346 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
RTN3-205ENST00000356000 PCDHB7Q9Y5E2 793 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms