RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 PEX11BO96011 259 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 MMP2P08253 660 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 PRPS1L1P21108 318 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 RGS4P49798 205 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 MMP15P51511 669 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 MECP2P51608 486 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 MAZP56270 477 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 FABP5Q01469 135 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 SP4Q02446 784 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 RAB40BQ12829 278 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 ECH1Q13011 328 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 GRIN2CQ14957 1233 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 ARSIQ5FYB1 569 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 RAB41Q5JT25 222 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 SIRPB2Q5JXA9 342 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 DGKKQ5KSL6 1271 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 HBMQ6B0K9 141 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 RGMBQ6NW40 437 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 OR6V1Q8N148 313 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 FAM98AQ8NCA5 519 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 ZNF485Q8NCK3 441 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 PXT1Q8NFP0 134 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 MDGA1Q8NFP4 955 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 OR8J2Q8NGG1 315 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 OR52I1Q8NGK6 324 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 GEMIN6Q8WXD5 167 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 CNOT9Q92600 299 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 EDEM1Q92611 657 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 CMTM7Q96FZ5 175 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 ARHGAP9Q9BRR9 750 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 TRIM62Q9BVG3 475 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 IFT27Q9BW83 186 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 PAPOLGQ9BWT3 736 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 POLDIP3Q9BY77 421 aaKnown RBP7.31□□□□□ -1.24
CCR9-201ENST00000355983 SLC39A8Q9C0K1 460 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 C11orf49Q9H6J7 331 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 IPPKQ9H8X2 491 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 DDIT4Q9NX09 232 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 COX16Q9P0S2 106 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 PIPOXQ9P0Z9 390 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 RPS6KB2Q9UBS0 482 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 ACSL6Q9UKU0 697 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 CHST2Q9Y4C5 530 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 PCDHB7Q9Y5E2 793 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 RAI2Q9Y5P3 530 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 PHIPQ8WWQ0 1821 aa7.31□□□□□ -1.24
CCR9-201ENST00000355983 TRAPPC13A5PLN9 417 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 NAP1L6A6NFF2 107 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 LRRC72A6NJI9 287 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 EFCAB7A8K855 629 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 FPGTO14772 594 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 LANCL1O43813 399 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 SUSD5O60279 629 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 PRAMEF2O60811 474 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 HIST1H2ABP04908 130 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 SMPD1P17405 629 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 PNPLA4P41247 253 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 KIR3DL1P43629 444 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 NDUFV1P49821 464 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 SELENOPP49908 381 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 CDH12P55289 794 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 SEC61A1P61619 476 aaKnown RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 PITPNAQ00169 270 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 EIF4EBP2Q13542 120 aaPredicted RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 BOP1Q14137 746 aaKnown RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 SV2CQ496J9 727 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 CDNFQ49AH0 187 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 HAGHLQ6PII5 290 aaPredicted RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 TMUB2Q71RG4 321 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 HIST3H2AQ7L7L0 130 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 RGL4Q8IZJ4 473 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 TMEM130Q8N3G9 435 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 C11orf65Q8NCR3 313 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 REPS2Q8NFH8 660 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 OR6K3Q8NGY3 331 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 COQ8AQ8NI60 647 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 GTF3AQ92664 365 aaKnown RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 HIST1H2ACQ93077 130 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 TPD52L3Q96J77 140 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 CDK15Q96Q40 435 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 DDOQ99489 341 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 GPR21Q99679 349 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 GSDMCQ9BYG8 508 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 FAM126AQ9BYI3 521 aaPredicted RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 TKTL2Q9H0I9 626 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 TDRD3Q9H7E2 651 aaKnown RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 NLE1Q9NVX2 485 aaPredicted RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 MALT1Q9UDY8 824 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 UBQLN1Q9UMX0 589 aaKnown RBP7.3□□□□□ -1.24
CCR9-201ENST00000355983 SLC6A14Q9UN76 642 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 LOC105369274A0A096LPK9 316 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 ANKRD61A6NGH8 418 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 OR51F1A6NGY5 319 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 ARHGEF33A8MVX0 844 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 SNRPGP15A8MWD9 76 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 NUDT19A8MXV4 375 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 SCAMP1O15126 338 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 TFP02787 698 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 IL5P05113 134 aa7.3□□□□□ -1.24
CCR9-201ENST00000355983 TFPIP10646 304 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms