RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 TMEM135Q86UB9 458 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 TMPRSS12Q86WS5 348 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 OR14L1PQ8NHC6 308 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 CREB3L4Q8TEY5 395 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 ZNF431Q8TF32 576 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 BMFQ96LC9 184 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 POU3F4P49335 361 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 POU4F2Q12837 409 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.19■□□□□ 0.341e-6■■■□□ 14.9
COL18A1-202ENST00000355480 TTC9BQ8N6N2 239 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 OR5J2Q8NH18 312 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 HDAC2Q92769 488 aaKnown RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 PCDH10Q9P2E7 1040 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 AURKAO14965 403 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 HOXB9P17482 250 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 FASLGP48023 281 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 MANEALQ5VSG8 457 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 ARHGAP11AQ6P4F7 1023 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 NPWQ8N729 165 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM68Q96MH6 324 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 ZNF285Q96NJ3 590 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 CCDC106Q9BWC9 280 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 NDUFV2P19404 249 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 GSTM2P28161 218 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 SUN5Q8TC36 379 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 SCRN2Q96FV2 425 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 TUBA1CQ9BQE3 449 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 CPEB1Q9BZB8 566 aaKnown RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 C10orf71Q711Q0 1435 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 GRXCR2A6NFK2 248 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 SFTPBP07988 381 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 C18orf21Q32NC0 220 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 IER5LQ5T953 404 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 KIAA0895LQ68EN5 471 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 HOXB13Q92826 284 aaPredicted RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 LINC00597Q9H2U6 94 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 CCDC86Q9H6F5 360 aaKnown RBP17.19■□□□□ 0.34
COL18A1-202ENST00000355480 LMAN1LQ9HAT1 526 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 GJD2Q9UKL4 321 aa17.19■□□□□ 0.34
COL18A1-202ENST00000355480 A8MVJ9 347 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 RBBP9O75884 186 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ACVR1BP36896 505 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM69Q5SWH9 247 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 TMEM151BQ8IW70 566 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 SLC25A44Q96H78 314 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-202ENST00000355480 CD207Q9UJ71 328 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 SCML1Q9UN30 329 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 LTN1O94822 1766 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 TRBV2A0A0J9YWF9 115 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 UGT2B10P36537 528 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 SLC26A5P58743 744 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 RAB15P59190 212 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 EIF2S3LQ2VIR3 472 aaKnown RBP17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ZFYVE21Q9BQ24 234 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 FTCDNL1E5RQL4 147 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ERCC1P07992 297 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ATF4P18848 351 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-202ENST00000355480 CRISP1P54107 249 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 CLLU1OSQ5K130 101 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ATAD3CQ5T2N8 411 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 RPLP0P6Q8NHW5 317 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 SPRYD4Q8WW59 207 aaPredicted RBP17.18■□□□□ 0.34
COL18A1-202ENST00000355480 DDIT4LQ96D03 193 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ZNF778Q96MU6 729 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 ANKMY1Q9P2S6 941 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 SLC22A31A6NKX4 558 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 MAP2K4P45985 399 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 TRIM73Q86UV7 250 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 HS3ST5Q8IZT8 346 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 IL17RCQ8NAC3 791 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 C16orf78Q8WTQ4 265 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 PPP1R14BQ96C90 147 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 MKS1Q9NXB0 559 aa17.18■□□□□ 0.34
COL18A1-202ENST00000355480 GGT3PA6NGU5 568 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 SLITRK5O94991 958 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 MT-ND2P03891 347 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CFL1P23528 166 aaKnown RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CD97P48960 835 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CLDN8P56748 225 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 AIMP2Q13155 320 aaKnown RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CNN2Q99439 309 aaKnown RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 ICKQ9UPZ9 632 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 IFT172Q9UG01 1749 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 IGKV6-21A0A0C4DH24 114 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 H0YAE9 185 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 H3BQ06 376 aaPredicted RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 NARSO43776 548 aaKnown RBP17.17■□□□□ 0.34
COL18A1-202ENST00000355480 PRSS56P0CW18 603 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 LDLRAD1Q5T700 205 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 ABHD17BQ5VST6 288 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 OR8J1Q8NGP2 316 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CSF2P04141 144 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 ACTA2P62736 377 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 ACTG2P63267 376 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 LRRC37A5PQ49AS3 106 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 TP53INP2Q8IXH6 220 aa17.17■□□□□ 0.34
COL18A1-202ENST00000355480 CHCHD4Q8N4Q1 142 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms