RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 SPTBP11277 2137 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 PNMA8CA0A1B0GUJ8 204 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 LOC110117498-PIK3R3F6TDL0 507 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 H0YIV9 168 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 AP3D1O14617 1153 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 RGS13O14921 159 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TNFRSF21O75509 655 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 PPIBP23284 216 aaKnown RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SLC15A1P46059 708 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 HTR3AP46098 478 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 PNLIPRP1P54315 467 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 DEFA1P59665 94 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 DEFA3P59666 94 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 KIAA1024LP59773 190 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TEKQ02763 1124 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 RPA4Q13156 261 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 KRR1Q13601 381 aaKnown RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SSX1Q16384 188 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 IFI44LQ53G44 452 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 NXNL2Q5VZ03 156 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF367Q7RTV3 350 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ABI3BPQ7Z7G0 1075 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 OR6F1Q8NGZ6 308 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 CRELD1Q96HD1 420 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 MAGEB10Q96LZ2 347 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TIMM29Q9BSF4 260 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 CDCA4Q9BXL8 241 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SYNPO2LQ9H987 977 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ACER3Q9NUN7 267 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 IMP3Q9NV31 184 aaKnown RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SPATA7Q9P0W8 599 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF282Q9UDV7 671 aaPredicted RBP8.14□□□□□ -1.11
TRIM55-204ENST00000353317 TBC1D24Q9ULP9 559 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 CFL2Q9Y281 166 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 AP1M2Q9Y6Q5 423 aa8.14□□□□□ -1.11
TRIM55-204ENST00000353317 SCN3AQ9NY46 2000 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GNG14A0A1W2PPG7 69 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GPR89AB7ZAQ6 455 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CCRL2O00421 344 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 STK25O00506 426 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 RNASET2O00584 256 aaKnown RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GPX5O75715 221 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 APOA1P02647 267 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GBAP04062 536 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GPR89BP0CG08 455 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ERGP11308 486 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ASMTP46597 345 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 LIMS1P48059 325 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF33BQ06732 778 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 EIF2B5Q13144 721 aaKnown RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 COL9A2Q14055 689 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 E2F2Q14209 437 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GANABQ14697 944 aaKnown RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ANXA8L1Q5VT79 327 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GRHL2Q6ISB3 625 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 TSSK4Q6SA08 328 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 UNC5DQ6UXZ4 953 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CCDC80Q76M96 950 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 NRARPQ7Z6K4 114 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 OR7G3Q8NG95 312 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 HUS1BQ8NHY5 278 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 NFKBIDQ8NI38 313 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CHTF18Q8WVB6 975 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CLDN23Q96B33 292 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SLC6A18Q96N87 628 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 FERD3LQ96RJ6 166 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SLC30A2Q9BRI3 323 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 C1QTNF7Q9BXJ2 289 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 TMEM121BQ9BXQ6 578 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 THSD1Q9NS62 852 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CUEDC1Q9NWM3 386 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ZNF624Q9P2J8 865 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 ACSL6Q9UKU0 697 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 N6AMT1Q9Y5N5 214 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 PDZK1P1A8MUH7 402 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 K7ESF4 209 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 PRAMEF10O60809 474 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 TBX6O95947 436 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 GASTP01350 101 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 HOXC4P09017 264 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SLC35G4P0C7Q5 338 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 BCKDHBP21953 392 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 TNFSF8P32971 234 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 OR2B6P58173 313 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SRP54P61011 504 aaKnown RBP8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SCARB2Q14108 478 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 FZD2Q14332 565 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 RPE65Q16518 533 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 UAP1L1Q3KQV9 507 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 PRAMEF14Q5SWL7 426 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SLX4IPQ5VYV7 408 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 TMPRSS11BQ86T26 416 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 WDR92Q96MX6 357 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 CAMK1GQ96NX5 476 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 NEDD4LQ96PU5 975 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 OR2M4Q96R27 311 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 OR2A14Q96R47 310 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 SLC35A5Q9BS91 424 aa8.13□□□□□ -1.11
TRIM55-204ENST00000353317 TAPBPLQ9BX59 468 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms