RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 AQP11Q8NBQ7 271 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 NUP43Q8NFH3 380 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 OR10G6Q8NH81 332 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 FAM81AQ8TBF8 368 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 DCUN1D5Q9BTE7 237 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 RSPO3Q9BXY4 272 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 DGCR6LQ9BY27 220 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 NMNAT1Q9HAN9 279 aaPredicted RBP15.73■□□□□ 0.11
SAMM50-201ENST00000350028 RHCGQ9UBD6 479 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 ACAD8Q9UKU7 415 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 CYP8B1Q9UNU6 501 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 MGAT4BQ9UQ53 548 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 CCDC88CQ9P219 2028 aa15.73■□□□□ 0.11
SAMM50-201ENST00000350028 A0A0J9YVX5 310 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 A0A1W2PPW3 197 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 FAAHO00519 579 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 CTSVO60911 334 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 INMTO95050 263 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 ADAP00813 363 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 GASTP01350 101 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 MT-ND2P03891 347 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 ALPPL2P10696 532 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 CDK4P11802 303 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 CD6P30203 668 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 GP2P55259 537 aaKnown RBP15.72■□□□□ 0.11
SAMM50-201ENST00000350028 EIF2B5Q13144 721 aaKnown RBP15.72■□□□□ 0.11
SAMM50-201ENST00000350028 DCST1Q5T197 706 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 Q6ZPB1 254 aaPredicted RBP15.72■□□□□ 0.11
SAMM50-201ENST00000350028 ANKRD13BQ86YJ7 626 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 SLC22A18ASQ8N1D0 253 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 FKBP10Q96AY3 582 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 TOE1Q96GM8 510 aaKnown RBP15.72■□□□□ 0.11
SAMM50-201ENST00000350028 C10orf90Q96M02 699 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 GAS2L1Q99501 681 aaPredicted RBP15.72■□□□□ 0.11
SAMM50-201ENST00000350028 BCL7BQ9BQE9 202 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 FUNDC2Q9BWH2 189 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 MS4A12Q9NXJ0 267 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 CALML5Q9NZT1 146 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 KCMF1Q9P0J7 381 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 LIPT1Q9Y234 373 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 SLC9A8Q9Y2E8 581 aa15.72■□□□□ 0.11
SAMM50-201ENST00000350028 SPTY2D1-AS1A0A0U1RR47 76 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 MBTPS2O43462 519 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 B3GALT2O43825 422 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 CHRM4P08173 479 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 TLX1P31314 330 aaPredicted RBP15.71■□□□□ 0.11
SAMM50-201ENST00000350028 NFATC3Q12968 1075 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 SMAD4Q13485 552 aaKnown RBP15.71■□□□□ 0.11
SAMM50-201ENST00000350028 SYT6Q5T7P8 510 aaPredicted RBP15.71■□□□□ 0.11
SAMM50-201ENST00000350028 DEF8Q6ZN54 512 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 ABHD13Q7L211 337 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 VANGL1Q8TAA9 524 aaPredicted RBP15.71■□□□□ 0.11
SAMM50-201ENST00000350028 FAM174AQ8TBP5 190 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 RSC1A1Q92681 617 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 GTPBP3Q969Y2 492 aaKnown RBP15.71■□□□□ 0.11
SAMM50-201ENST00000350028 DTNBP1Q96EV8 351 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 OR7D2Q96RA2 312 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 SIGLEC11Q96RL6 698 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 ZFYVE21Q9BQ24 234 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 YIPF4Q9BSR8 244 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 SLC2A4RGQ9NR83 387 aa15.71■□□□□ 0.11
SAMM50-201ENST00000350028 WSB2Q9NYS7 404 aaPredicted RBP15.71■□□□□ 0.11
SAMM50-201ENST00000350028 TRBV4-1A0A0J9YWV2 114 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 CASC3O15234 703 aaKnown RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 LGI1O95970 557 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 THEGLP0DJG4 465 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 ELAVL4P26378 380 aaKnown RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 ACVR2AP27037 513 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 MC3RP41968 323 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 CRISP1P54107 249 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 FUT5Q11128 374 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 RUNX2Q13950 521 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 GPAT3Q53EU6 434 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 FGD3Q5JSP0 725 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 MANEAQ5SRI9 462 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 KLHL17Q6TDP4 642 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 SYT13Q7L8C5 426 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 TAF8Q7Z7C8 310 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 LRRC25Q8N386 305 aaPredicted RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 ZNF655Q8N720 491 aaPredicted RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 OR4K14Q8NGD5 310 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 OR4D11Q8NGI4 311 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 OR9A2Q8NGT5 310 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 BAHD1Q8TBE0 780 aaPredicted RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 MYDGFQ969H8 173 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 RERGQ96A58 199 aaPredicted RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 C16orf58Q96GQ5 468 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 PINK1Q9BXM7 581 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 ACTRT3Q9BYD9 372 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 UCK2Q9BZX2 261 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 TCEAL2Q9H3H9 227 aaPredicted RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 GPR27Q9NS67 375 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 DNAAF2Q9NVR5 837 aaKnown RBP15.71■□□□□ 0.1
SAMM50-201ENST00000350028 ZNF226Q9NYT6 803 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 NTMQ9P121 344 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 PSORS1C1Q9UIG5 152 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 ENPP5Q9UJA9 477 aa15.71■□□□□ 0.1
SAMM50-201ENST00000350028 A0A0J9YY10 115 aa15.7■□□□□ 0.1
SAMM50-201ENST00000350028 A0A1W2PS29 197 aa15.7■□□□□ 0.1
SAMM50-201ENST00000350028 ZAR1LA6NP61 321 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms