RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GLIPR2Q9H4G4 154 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 DDX28Q9NUL7 540 aaKnown RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 NDOR1Q9UHB4 597 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 HCN2Q9UL51 889 aa17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 SPIN1Q9Y657 262 aaPredicted RBP17.1■□□□□ 0.33
PTP4A3-202ENST00000349124 MYL12BO14950 172 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 UGT2B17O75795 530 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 CSF2P04141 144 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 ADRB3P13945 408 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 EPCAMP16422 314 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 FNDC3BQ53EP0 1204 aaKnown RBP17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 ABI3BPQ7Z7G0 1075 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 MMAAQ8IVH4 418 aaKnown RBP17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 TBC1D19Q8N5T2 526 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 PROKR2Q8NFJ6 384 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 KLK6Q92876 244 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 LRIG1Q96JA1 1093 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 DHRS1Q96LJ7 313 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 C17orf62Q9BQA9 187 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 SRRQ9GZT4 340 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 RACGAP1Q9H0H5 632 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 KLHL31Q9H511 634 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 NDUFB11Q9NX14 153 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 TOR4AQ9NXH8 423 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 SSR3Q9UNL2 185 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 MN1Q10571 1320 aaPredicted RBP17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 A0A1W2PQL4 384 aaPredicted RBP17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 HYKKA2RU49 373 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 C8orf89P0DMQ9 161 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 CEBPBP17676 345 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 PTNP21246 168 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 KELP23276 732 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 SDC2P34741 201 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 GPC1P35052 558 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 SLAMF1Q13291 335 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 ARHGAP15Q53QZ3 475 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 MEDAGQ5VYS4 303 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 ZNF582Q96NG8 517 aaPredicted RBP17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 FNDC11Q9BVV2 318 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 FBXW2Q9UKT8 454 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 TRAPPC4Q9Y296 219 aa17.09■□□□□ 0.33
PTP4A3-202ENST00000349124 GJA8P48165 433 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 RPS25P62851 125 aaKnown RBP17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 HOXC5Q00444 222 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 KRR1Q13601 381 aaKnown RBP17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 FAM131AQ6UXB0 335 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 AMZ2Q86W34 360 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 KIF18BQ86Y91 864 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 CAMKK1Q8N5S9 505 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 C16orf58Q96GQ5 468 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 NELL2Q99435 816 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 AIF1LQ9BQI0 150 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 DPH7Q9BTV6 452 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 BEX2Q9BXY8 128 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 ZCCHC3Q9NUD5 404 aaKnown RBP17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 PLEKHB1Q9UF11 243 aaPredicted RBP17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 ITGB1BP2Q9UKP3 347 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 ACAD8Q9UKU7 415 aa17.08■□□□□ 0.33
PTP4A3-202ENST00000349124 CHD9Q3L8U1 2897 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 C17orf113A0A1B0GUU1 675 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 PGRMC2O15173 223 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ERAL1O75616 437 aaKnown RBP17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 CHRM4P08173 479 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ENDOUP21128 410 aaKnown RBP17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 BUD31P41223 144 aaPredicted RBP17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 DUSP2Q05923 314 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 SNAPC1Q16533 368 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF517Q6ZMY9 492 aaPredicted RBP17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF793Q6ZN11 406 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 PDZD3Q86UT5 571 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 KRT73Q86Y46 540 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 SLC30A8Q8IWU4 369 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 LINC01555Q8NAE3 123 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 C1GALT1C1Q96EU7 318 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ST6GAL2Q96JF0 529 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 LINC00615Q96LM1 132 aaPredicted RBP17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF607Q96SK3 696 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 RHBGQ9H310 441 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 ZNF221Q9UK13 617 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 CMAHPQ9Y471 501 aa17.08■□□□□ 0.32
PTP4A3-202ENST00000349124 A0A1W2PPV9 198 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 SCAMP1O15126 338 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 PRNPP04156 253 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 PCCBP05166 539 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 ADH5P11766 374 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 ITGB7P26010 798 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 EPHA5P54756 1037 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 INSL4Q14641 139 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 CLEC12AQ5QGZ9 265 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 SLC9A6Q92581 669 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 ZBED6CLQ96FA7 236 aaPredicted RBP17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 TESQ9UGI8 421 aaKnown RBP17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 GAS1P54826 345 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 RUNX1T1Q06455 604 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 MLLT11Q13015 90 aaPredicted RBP17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 LASP1Q14847 261 aaKnown RBP17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 NUMA1Q14980 2115 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 OCLNQ16625 522 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 C1QTNF12Q5T7M4 302 aa17.07■□□□□ 0.32
PTP4A3-202ENST00000349124 NDUFAF5Q5TEU4 345 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms