RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 SLITRK5O94991 958 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ATP1B1P05026 303 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CDH2P19022 906 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SKP1P63208 163 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TUBA4AP68366 448 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SHC2P98077 582 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 PUM1Q14671 1186 aaKnown RBP eCLIP21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 RNF220Q5VTB9 566 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 OR7G2Q8NG99 324 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 OR5T3Q8NGG3 340 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 PROX1Q92786 737 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 C16orf58Q96GQ5 468 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ZNF354BQ96LW1 612 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 COL21A1Q96P44 957 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 OR7D2Q96RA2 312 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SPATA5L1Q9BVQ7 753 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 DDX18Q9NVP1 670 aaKnown RBP21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SEC14L3Q9UDX4 400 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 A0A0G2JPF8 293 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 LOC100130705A0A1B0GUX0 176 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 A8MVJ9 347 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 HNRNPCL2B2RXH8 293 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 HNRNPCL3B7ZW38 293 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 GPR75O95800 540 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 HNRNPCL4P0DMR1 293 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CTSKP43235 329 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 RPS6KA3P51812 740 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 HMGA2P52926 109 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SPIBQ01892 262 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 NDUFA9Q16795 377 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 THAP5Q7Z6K1 395 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ZDHHC12Q96GR4 267 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 YIPF4Q9BSR8 244 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 RSPO3Q9BXY4 272 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 EPB41L1Q9H4G0 881 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TUBA8Q9NY65 449 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 KIF17Q9P2E2 1029 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 KCND3Q9UK17 655 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 LIPT1Q9Y234 373 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FAM32AQ9Y421 112 aaKnown RBP21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 RNF215Q9Y6U7 377 aa21.12■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TRIM64CA6NLI5 447 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SGK494L7N484 410 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 NUDT21O43809 227 aaKnown RBP21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 KIF1CO43896 1103 aaKnown RBP21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 UGT2B11O75310 529 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SEC24DO94855 1032 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CTSBP07858 339 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CHRM4P08173 479 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 PABPC4LP0CB38 370 aaKnown RBP21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ATP6V1B1P15313 513 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 LIMS1P48059 325 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 GFERP55789 205 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ZXDAP98168 799 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CYP27C1Q4G0S4 372 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ZNF628Q5EBL2 1059 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FOXB2Q5VYV0 432 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 WDR5BQ86VZ2 330 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 OR4N5Q8IXE1 308 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CARFQ8N187 725 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TMEM52Q8NDY8 209 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TGM7Q96PF1 710 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 PRMT8Q9NR22 394 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CALML5Q9NZT1 146 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 LRIT1Q9P2V4 623 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 PLCL2Q9UPR0 1127 aa21.11■□□□□ 0.97
TNFRSF10B-202ENST00000347739 DUXAA6NLW8 204 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FGF17O60258 216 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 RDH16O75452 317 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 AGR2O95994 175 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 MLLT3P42568 568 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FNTBP49356 437 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 NR1H2P55055 460 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FAM53BQ14153 422 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 LYSMD4Q5XG99 296 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 MFSD12Q6NUT3 480 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TSSK4Q6SA08 328 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FAM111BQ6SJ93 734 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TTC29Q8NA56 475 aaPredicted RBP21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ATG16L2Q8NAA4 619 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 OR9A4Q8NGU2 314 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 GIPC3Q8TF64 312 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 COL26A1Q96A83 441 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TRNT1Q96Q11 434 aaKnown RBP21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 PSD2Q9BQI7 771 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 KRT84Q9NSB2 600 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 NDUFA13Q9P0J0 144 aa21.1■□□□□ 0.97
TNFRSF10B-202ENST00000347739 A0A087WV62 115 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 MITFO75030 526 aaPredicted RBP21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 TDGF1P13385 188 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SOX18P35713 384 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CDH12P55289 794 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 INAVAQ3KP66 663 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 FHL5Q5TD97 284 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ZNF691Q5VV52 312 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 GARNL3Q5VVW2 1013 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 CDC73Q6P1J9 531 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 SLC25A45Q8N413 288 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 ZNF675Q8TD23 568 aa21.09■□□□□ 0.97
TNFRSF10B-202ENST00000347739 OTUB1Q96FW1 271 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms