RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 COL26A1Q96A83 441 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 C16orf58Q96GQ5 468 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 RNF145Q96MT1 663 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 SEPHS2Q99611 448 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 NDC1Q9BTX1 674 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 MAGIXQ9H6Y5 334 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 PRTFDC1Q9NRG1 225 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 AGPAT4Q9NRZ5 378 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 LANCL2Q9NS86 450 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 RXFP3Q9NSD7 469 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 DHCR7Q9UBM7 475 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 C19orf53Q9UNZ5 99 aaPredicted RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 AURKCQ9UQB9 309 aa10.29□□□□□ -0.76
ECM1-201ENST00000346569 MRPS33Q9Y291 106 aaKnown RBP10.29□□□□□ -0.76
ECM1-201ENST00000346569 D6RAR5 112 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 M0QX08 132 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 CLDN4O14493 209 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 SLITRK5O94991 958 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 PRSS23O95084 383 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 ONECUT2O95948 504 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 SEMG1P04279 462 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 CT62P0C5K7 136 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 HOXB6P17509 224 aaKnown RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 FASP25445 335 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 GALNSP34059 522 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 MAP3K8P41279 467 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 XCR1P46094 333 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 OR1D4P47884 311 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 PRKAG1P54619 331 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 RPS26P62854 115 aaKnown RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 PRR5P85299 388 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 CHRNB3Q05901 458 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 DSG2Q14126 1118 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 IQCCQ4KMZ1 466 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 FAM98BQ52LJ0 330 aaKnown RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 LPCAT4Q643R3 524 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 REEP3Q6NUK4 255 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 DGAT2L6Q6ZPD8 337 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 ST13P4Q8IZP2 240 aaPredicted RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 METTL27Q8N6F8 245 aaPredicted RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 SIMC1Q8NDZ2 872 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 NFKBIDQ8NI38 313 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 XAGE5Q8WWM1 108 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 RAB8BQ92930 207 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 PPWD1Q96BP3 646 aaKnown RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 MAGED4Q96JG8 741 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 SLC35G5Q96KT7 338 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 OR1F2PQ96R84 312 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 RSPO3Q9BXY4 272 aaPredicted RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 ALOXE3Q9BYJ1 711 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 OR51I1Q9H343 314 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 ANKRA2Q9H9E1 313 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 FANCEQ9HB96 536 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 ZNF304Q9HCX3 659 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 MAT2BQ9NZL9 334 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 RPS6KA6Q9UK32 745 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 SAMD4AQ9UPU9 718 aaKnown RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 ZNF451Q9Y4E5 1061 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 KCNE3Q9Y6H6 103 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 MAU2Q9Y6X3 613 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 SPTBN4Q9H254 2564 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 COL5A1P20908 1838 aaPredicted RBP10.28□□□□□ -0.76
ECM1-201ENST00000346569 SCN2AQ99250 2005 aa10.28□□□□□ -0.76
ECM1-201ENST00000346569 A0A1B0GX78 115 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 OR2W5A6NFC9 320 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 JRKO75564 520 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 BMP10O95393 424 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 PGM3O95394 542 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 FGF5P12034 268 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 TGM1P22735 817 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 RORAP35398 523 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 MAGEA2P43356 314 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 CLCN2P51788 898 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 SELENOWP63302 87 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 MRPS35P82673 323 aaKnown RBP10.27□□□□□ -0.77
ECM1-201ENST00000346569 LASP1Q14847 261 aaKnown RBP10.27□□□□□ -0.77
ECM1-201ENST00000346569 SYPL1Q16563 259 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 INTS11Q5TA45 600 aaKnown RBP10.27□□□□□ -0.77
ECM1-201ENST00000346569 AP1ARQ63HQ0 302 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 PRR23CQ6ZRP0 262 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 B3GNT8Q7Z7M8 397 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 GALNT10Q86SR1 603 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.77
ECM1-201ENST00000346569 LGI4Q8N135 537 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 ANKFN1Q8N957 763 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 SLC38A9Q8NBW4 561 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 HOXB13Q92826 284 aaPredicted RBP10.27□□□□□ -0.77
ECM1-201ENST00000346569 NCLNQ969V3 563 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 SLC35A4Q96G79 324 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 C7orf34Q96L11 122 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 OR6C1Q96RD1 312 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 ACTRT3Q9BYD9 372 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 CXorf21Q9HAI6 301 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 NTN4Q9HB63 628 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 NECTIN3Q9NQS3 549 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 SLC22A11Q9NSA0 550 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 OCIAD1Q9NX40 245 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 NDOR1Q9UHB4 597 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 SRPK3Q9UPE1 567 aa10.27□□□□□ -0.77
ECM1-201ENST00000346569 PTPRZ1P23471 2315 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms