RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ARNTL2Q8WYA1 636 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 DCUN1D4Q92564 292 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 FCRL1Q96LA6 429 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 C12orf42Q96LP6 360 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 NECTIN4Q96NY8 510 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 TREX2Q9BQ50 279 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 GPRC5BQ9NZH0 403 aa11.57□□□□□ -0.56
COL12A1-202ENST00000345356 CNOT2Q9NZN8 540 aaKnown RBP11.57□□□□□ -0.56
COL12A1-202ENST00000345356 FAM208AQ9UK61 1670 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 COL5A2P05997 1499 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ERI3O43414 337 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 PIP5K1CO60331 668 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TP53P04637 393 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ADORA3P0DMS8 318 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 FCN2Q15485 313 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 FAM189A2Q15884 450 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 RAB41Q5JT25 222 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ALG1LQ6GMV1 187 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 IDO2Q6ZQW0 420 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TAS1R3Q7RTX0 852 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 IMP4Q96G21 291 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 PELOQ9BRX2 385 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 STRA6Q9BX79 667 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 GPR45Q9Y5Y3 372 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 UNC119BA6NIH7 251 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SLC22A31A6NKX4 558 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 HSPA12AO43301 675 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SULT1B1O43704 296 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 B3GALT2O43825 422 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 GSRP00390 522 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SNRNP70P08621 437 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 C8orf89P0DMQ9 161 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 POLR2CP19387 275 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 RPS26P62854 115 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 POU6F2P78424 691 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TAP2Q03519 686 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SPIN3Q5JUX0 258 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 RGMBQ6NW40 437 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 C15orf39Q6ZRI6 1047 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SSX9Q7RTT3 188 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 CHCHD4Q8N4Q1 142 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 OR56A3Q8NH54 315 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 FUBP1Q96AE4 644 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 NEURL2Q9BR09 285 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SLC33A1O00400 549 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 GJA5P36382 358 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ALDH3B1P43353 468 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 DUSP6Q16828 381 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 C18orf21Q32NC0 220 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ANKK1Q8NFD2 765 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF419Q96HQ0 510 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SMOC2Q9H3U7 446 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 WDR45Q9Y484 360 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 DLG5Q8TDM6 1919 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TTLL8A6PVC2 850 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF705GA8MUZ8 300 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 H7C417 338 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SCAMP1O15126 338 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 IFNA10P01566 189 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 IFNA4P05014 189 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 PCCBP05166 539 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 RAB3AP20336 220 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 MAGEA6P43360 314 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 DLX5P56178 289 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 GAS6Q14393 721 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TMIGD1Q6UXZ0 262 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 NUP54Q7Z3B4 507 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 RETREG3Q86VR2 466 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 GRAMD2AQ8IUY3 354 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TEX26Q8N6G2 289 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 OR4K5Q8NGD3 323 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 PLD4Q96BZ4 506 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 DPYSL5Q9BPU6 564 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TAPBPLQ9BX59 468 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 SYNPO2LQ9H987 977 aa11.56□□□□□ -0.56
COL12A1-202ENST00000345356 DUS2Q9NX74 493 aaKnown RBP11.56□□□□□ -0.56
COL12A1-202ENST00000345356 TRBV23OR9-2A0A075B6M9 112 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 BLOC1S5-TXNDC5H3BN57 136 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 CACNG3O60359 315 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SCO1O75880 301 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 HRGP04196 525 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ASGR1P07306 291 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TIA1P31483 386 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 CSKP41240 450 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 CAV3P56539 151 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 TIGD5Q53EQ6 642 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 AVPI1Q5T686 147 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 LURAP1Q96LR2 239 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 MRPS30Q9NP92 439 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 USP22Q9UPT9 525 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 PEAK1Q9H792 1746 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ARHGAP33O14559 1287 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 STATHP02808 62 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ALDOCP09972 364 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 HSD3B1P14060 373 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 SERINC3Q13530 473 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF789Q5FWF6 425 aa11.55□□□□□ -0.56
COL12A1-202ENST00000345356 RNASE10Q5GAN6 216 aaKnown RBP11.55□□□□□ -0.56
COL12A1-202ENST00000345356 LINC00299Q6ZSB3 139 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms