RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MARVELD2Q8N4S9 558 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SLC15A4Q8N697 577 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 GBP7Q8N8V2 638 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SIMC1Q8NDZ2 872 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SLC22A8Q8TCC7 542 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SPACA9Q96E40 222 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 CCDC126Q96EE4 140 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SGCZQ96LD1 299 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF681Q96N22 645 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 TTTY12Q9BZ98 90 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 DEFB127Q9H1M4 99 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 PROK2Q9HC23 129 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SACM1LQ9NTJ5 587 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 OXSMQ9NWU1 459 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 DTX4Q9Y2E6 619 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 KLF2Q9Y5W3 355 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-202ENST00000344726 LIPGQ9Y5X9 500 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 MYO9AB2RTY4 2548 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 MED12Q93074 2177 aa13.3□□□□□ -0.28
HMGN3-202ENST00000344726 APCP25054 2843 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 C2orf92A0A1B0GVN3 265 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 SERTM1A2A2V5 107 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 PCDH7O60245 1069 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-202ENST00000344726 GUCY1B2O75343 617 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 PDE9AO76083 593 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 IL3P08700 152 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 FBXO45P0C2W1 286 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-202ENST00000344726 CPA3P15088 417 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 HTR1EP28566 365 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 SERPINB3P29508 390 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 PIGAP37287 484 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 ALDH9A1P49189 494 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 CASP6P55212 293 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 PPIAP62937 165 aaKnown RBP13.29□□□□□ -0.28
HMGN3-202ENST00000344726 BTKQ06187 659 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 PCLAFQ15004 111 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 LTB4RQ15722 352 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 MTFR2Q6P444 385 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 FAM47EQ6ZV65 393 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 C10orf107Q8IVU9 208 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 SLC34A3Q8N130 599 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 RPRMLQ8N4K4 120 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 ADCY4Q8NFM4 1077 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 OR10G3Q8NGC4 313 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 RDH11Q8TC12 318 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 PAQR8Q8TEZ7 354 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 ADIPOR1Q96A54 375 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 KLHL29Q96CT2 875 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 CNRIP1Q96F85 164 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-202ENST00000344726 FAM173AQ9BQD7 235 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 SHCBP1LQ9BZQ2 653 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 OR10A5Q9H207 317 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 ZDHHC11Q9H8X9 412 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-202ENST00000344726 MAT2BQ9NZL9 334 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 DLGAP4Q9Y2H0 992 aa13.29□□□□□ -0.28
HMGN3-202ENST00000344726 CHCHD2Q9Y6H1 151 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-202ENST00000344726 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
HMGN3-202ENST00000344726 LRATO95237 230 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 P04436 131 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 ATP1B1P05026 303 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 CELA3AP09093 270 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 TIA1P31483 386 aaKnown RBP eCLIP13.28□□□□□ -0.28
HMGN3-202ENST00000344726 PTGS2P35354 604 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 DEKP35659 375 aaKnown RBP13.28□□□□□ -0.28
HMGN3-202ENST00000344726 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 ACSM2AQ08AH3 577 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 EXOSC7Q15024 291 aaKnown RBP13.28□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-202ENST00000344726 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 EMC4Q5J8M3 183 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 PRAMEF20Q5VT98 475 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 ACSM2BQ68CK6 577 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 WDR93Q6P2C0 686 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 GALNT18Q6P9A2 607 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 GK5Q6ZS86 529 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 CD163Q86VB7 1156 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 VWA5B2Q8N398 1253 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 BANPQ8N9N5 519 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 FAM13CQ8NE31 585 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 C16orf78Q8WTQ4 265 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 CTHRC1Q96CG8 243 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 BRINP2Q9C0B6 783 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 SIRT5Q9NXA8 310 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 ZNF639Q9UID6 485 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 UTS2RQ9UKP6 389 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 PLLPQ9Y342 182 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 ARHGAP21Q5T5U3 1957 aa13.28□□□□□ -0.28
HMGN3-202ENST00000344726 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
HMGN3-202ENST00000344726 SLU7O95391 586 aaKnown RBP13.27□□□□□ -0.29
HMGN3-202ENST00000344726 CBX7O95931 251 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms