RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 YARS2Q9Y2Z4 477 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 KNTC1P50748 2209 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 UBE2QL1A1L167 161 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 HPGDSO60760 199 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SRPRAP08240 638 aaKnown RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SPNP16150 400 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 GPX2P18283 190 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 TIAL1Q01085 375 aaKnown RBP eCLIP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF155Q12901 538 aaPredicted RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SELENBP1Q13228 472 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 FGFBP1Q14512 234 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNHIT3Q15649 155 aaPredicted RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF783Q6ZMS7 281 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 LRRTM4Q86VH4 590 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 CPA6Q8N4T0 437 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 HORMAD2Q8N7B1 307 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 OR4F15Q8NGB8 312 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 FIBINQ8TAL6 211 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 MSANTD3Q96H12 275 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 CASD1Q96PB1 797 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SPHK2Q9NRA0 654 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC27A6Q9Y2P4 619 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 OR1A2Q9Y585 309 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ATAD5Q96QE3 1844 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 RP1P56715 2156 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 A0A1B0GVT2 93 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PRSS23O95084 383 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 NAA10P41227 235 aaPredicted RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 OMPP47874 163 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 ZMAT1Q5H9K5 638 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PLBD1Q6P4A8 553 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 DHRS4L2Q6PKH6 230 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 PRSS58Q8IYP2 241 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 C12orf76Q8N812 135 aaPredicted RBP11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 DEDD2Q8WXF8 326 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 OR5P2Q8WZ92 322 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 EGLN3Q9H6Z9 239 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 RNF121Q9H920 327 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 MARCH5Q9NX47 278 aa11.81□□□□□ -0.52
SNRNP48-201ENST00000342415 CACNA1IQ9P0X4 2223 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 UPK1AO00322 258 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 FGF18O76093 207 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SOX30O94993 753 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 ADAP00813 363 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 CSN2P05814 226 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 PCSK2P16519 638 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SOX2P48431 317 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 PGDP52209 483 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 TOR1AIP1Q5JTV8 583 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 LIMS2Q7Z4I7 341 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 NRMQ8IXM6 262 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 HDDC3Q8N4P3 179 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 EID2BQ96D98 161 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 ARSGQ96EG1 525 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 TMEM175Q9BSA9 504 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 NDRG4Q9ULP0 352 aaKnown RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 PRKRAO75569 313 aaKnown RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 ETHE1O95571 254 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 IFNGP01579 166 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 C1SP09871 688 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 IMPA1P29218 277 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 STAT5AP42229 794 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC16A12Q6ZSM3 486 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 CEACAM19Q7Z692 300 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 RANBP3LQ86VV4 465 aaPredicted RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 TRAM1L1Q8N609 369 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 NKD1Q969G9 470 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 BCL7BQ9BQE9 202 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 FUZQ9BT04 418 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 DPCDQ9BVM2 203 aaPredicted RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 RDH8Q9NYR8 311 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 CACNB4O00305 520 aaPredicted RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 TGM5O43548 720 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SLC35G6P0C7Q6 338 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 BMP1P13497 986 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 HSD3B1P14060 373 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 GNSP15586 552 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SYN1P17600 705 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 GSTM3P21266 225 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 HSD3B2P26439 372 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 GRPRP30550 384 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 UQCRC1P31930 480 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 VIPR2P41587 438 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 NRIP1P48552 1158 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 PFN3P60673 137 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 KCNC3Q14003 757 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 TATDN3Q17R31 274 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 CCDC157Q569K6 752 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 NDUFAF5Q5TEU4 345 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 MLIPQ5VWP3 458 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SFRP4Q6FHJ7 346 aaPredicted RBP11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 NOXA1Q86UR1 476 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 DCUN1D3Q8IWE4 304 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 SYT14Q8NB59 555 aa11.8□□□□□ -0.52
SNRNP48-201ENST00000342415 TCEAL4Q96EI5 215 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms