RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 EHD3Q9NZN3 535 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 C19orf25Q9UFG5 118 aaPredicted RBP11.07□□□□□ -0.64
C2orf88-201ENST00000340623 CKAP5Q14008 2032 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 IGHV5-51A0A0C4DH38 117 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 PGRMC2O15173 223 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ALPPP05187 535 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 RBMS1P29558 406 aaKnown RBP11.07□□□□□ -0.64
C2orf88-201ENST00000340623 FASLGP48023 281 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 RXRGP48443 463 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 OC90Q02509 493 aaPredicted RBP11.07□□□□□ -0.64
C2orf88-201ENST00000340623 SYT16Q17RD7 645 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 PLEKHM3Q6ZWE6 761 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 CCDC80Q76M96 950 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 TESCQ96BS2 214 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ACTL8Q9H568 366 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ADAM29Q9UKF5 820 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 PCOLCE2Q9UKZ9 415 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 ERVK-11Q9UQG0 969 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 WASHC1A8K0Z3 465 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 OR10H3O60404 316 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 FAM20BO75063 409 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 SNAP29O95721 258 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 FURINP09958 794 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 CDK4P11802 303 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 OTX2P32243 289 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 VMACQ2NL98 169 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 IFI44LQ53G44 452 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 COQ5Q5HYK3 327 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 C3orf38Q5JPI3 329 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 FIGNL1Q6PIW4 674 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 CDK20Q8IZL9 346 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 OR4C6Q8NH72 309 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 BTBD9Q96Q07 612 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 HCN4Q9Y3Q4 1203 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 LAMA3Q16787 3333 aa11.07□□□□□ -0.64
C2orf88-201ENST00000340623 LOC100506127A0A0U1RQW1 187 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PEX12O00623 359 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 FLRT2O43155 660 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 HBQ1P09105 142 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TFPTP0C1Z6 253 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 EMP2P54851 167 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PIGFQ07326 219 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CDC73Q6P1J9 531 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 FBXO42Q6P3S6 717 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TMEM151BQ8IW70 566 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 ZNF563Q8TA94 476 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 DAZLQ92904 295 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CEP19Q96LK0 163 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 FAM60AQ9NP50 221 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PPT2Q9UMR5 302 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 GPR75O95800 540 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 FABP3P05413 133 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CCNA2P20248 432 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 GPR3P46089 330 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 MASP1P48740 699 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CDK9P50750 372 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 SLC16A1P53985 500 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 UBE2IP63279 158 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TNFRSF17Q02223 184 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 MERTKQ12866 999 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 ZNF630Q2M218 657 aaPredicted RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 FAM91A1Q658Y4 838 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 LILRA2Q8N149 483 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 SLC25A45Q8N413 288 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PILRBQ9UKJ0 227 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PCDHA9Q9Y5H5 950 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 SCN3AQ9NY46 2000 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 DOCK9Q9BZ29 2069 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 SPTA1P02549 2419 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 OR2A25A4D2G3 310 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 RNASET2O00584 256 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 SOCS2O14508 198 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 JRKO75564 520 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 HMGN2P05204 90 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CDKN2CP42773 168 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TRA2BP62995 288 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TRAP1Q12931 704 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 MADCAM1Q13477 382 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 EXOSC7Q15024 291 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 REEP3Q6NUK4 255 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TMEM71Q6P5X7 295 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 HS3ST5Q8IZT8 346 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 OR5D16Q8NGK9 328 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TANKQ92844 425 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TMBIM1Q969X1 311 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 KIAA1143Q96AT1 154 aaPredicted RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 ART5Q96L15 291 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CCDC74BQ96LY2 380 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 TEFMQ96QE5 360 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 LPAR4Q99677 370 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PDP1Q9P0J1 537 aaPredicted RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 ERVK-19Q9WJR5 959 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 CFL2Q9Y281 166 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 PTRH2Q9Y3E5 179 aaKnown RBP11.06□□□□□ -0.64
C2orf88-201ENST00000340623 GMPPBQ9Y5P6 360 aa11.06□□□□□ -0.64
C2orf88-201ENST00000340623 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms