RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 UGT3A2Q3SY77 523 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 PIGGQ5H8A4 983 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 FAM71E1Q6IPT2 247 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 C16orf47Q6ZP98 133 aaPredicted RBP17.77■□□□□ 0.44
SYNE4-202ENST00000340477 Q6ZSR9 355 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 TICAM1Q8IUC6 712 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 POGLUT1Q8NBL1 392 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 ST6GALNAC3Q8NDV1 305 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 ZNF675Q8TD23 568 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 NR4A3Q92570 626 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 ERP27Q96DN0 273 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 SGCZQ96LD1 299 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 TAAR6Q96RI8 345 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 BARD1Q99728 777 aaKnown RBP17.77■□□□□ 0.44
SYNE4-202ENST00000340477 MAT2BQ9NZL9 334 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 PRODH2Q9UF12 536 aa17.77■□□□□ 0.44
SYNE4-202ENST00000340477 BAHCC1Q9P281 2608 aa17.77■□□□□ 0.43
SYNE4-202ENST00000340477 UBR5O95071 2799 aaPredicted RBP17.76■□□□□ 0.43
SYNE4-202ENST00000340477 SLITRK5O94991 958 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 CT62P0C5K7 136 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ARRB2P32121 409 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 HPCAL1P37235 193 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 TMED10P49755 219 aaKnown RBP17.76■□□□□ 0.43
SYNE4-202ENST00000340477 PMP22Q01453 160 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ALDH6A1Q02252 535 aaKnown RBP17.76■□□□□ 0.43
SYNE4-202ENST00000340477 MAD2L1Q13257 205 aaPredicted RBP17.76■□□□□ 0.43
SYNE4-202ENST00000340477 KIAA0040Q15053 153 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 XKR7Q5GH72 579 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ATG16L1Q676U5 607 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 FAM180BQ6P0A1 224 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 CCDC116Q8IYX3 515 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF781Q8N8C0 355 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 GOLM1Q8NBJ4 401 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 PSD4Q8NDX1 1056 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ADCY4Q8NFM4 1077 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 RAB3IL1Q8TBN0 382 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 TUBGCP3Q96CW5 907 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 FCRL1Q96LA6 429 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF681Q96N22 645 aa17.76■□□□□ 0.43
SYNE4-202ENST00000340477 ITM2AO43736 263 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 PEX11AO75192 247 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF24P17028 368 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 SDC1P18827 310 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 RPL3P39023 403 aaKnown RBP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 UQCRFS1P47985 274 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 RPL14P50914 215 aaKnown RBP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 NCBP2P52298 156 aaKnown RBP eCLIP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 PDCD2Q16342 344 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 FAM111BQ6SJ93 734 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 R3HCC1LQ7Z5L2 792 aaKnown RBP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 FNDC5Q8NAU1 212 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 OR9A2Q8NGT5 310 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 TP53INP1Q96A56 240 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 SPACA9Q96E40 222 aaPredicted RBP17.75■□□□□ 0.43
SYNE4-202ENST00000340477 TSSK3Q96PN8 268 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 SLX1AQ9BQ83 275 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 VIPAS39Q9H9C1 493 aa17.75■□□□□ 0.43
SYNE4-202ENST00000340477 ATP6AP2A0A1C7CYW4 349 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ASPDHA6ND91 283 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 PDPK1O15530 556 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ATP6AP2O75787 350 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 CBX6O95503 412 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 CLPSP04118 112 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 P04436 131 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 MEOX1P50221 254 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 NR0B1P51843 470 aaKnown RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 DCAF7P61962 342 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 RBPJQ06330 500 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 BST1Q10588 318 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 MRPL49Q13405 166 aaKnown RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 EXOSC7Q15024 291 aaKnown RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 LTB4RQ15722 352 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 CEBPEQ15744 281 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 RFTN2Q52LD8 501 aaPredicted RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF628Q5EBL2 1059 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF227Q86WZ6 799 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ZNF615Q8N8J6 731 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 C17orf47Q8NEP4 570 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 OR52R1Q8NGF1 315 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 C16orf52Q8NHV5 167 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ZFP28Q8NHY6 868 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 GFM2Q969S9 779 aaKnown RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 PPCDCQ96CD2 204 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ATP6V1G3Q96LB4 118 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 REEP4Q9H6H4 257 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 SACM1LQ9NTJ5 587 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 TAS2R7Q9NYW3 318 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 EIF3LQ9Y262 564 aaKnown RBP17.74■□□□□ 0.43
SYNE4-202ENST00000340477 ESPL1Q14674 2120 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 SVILO95425 2214 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 TENM4Q6N022 2769 aa17.74■□□□□ 0.43
SYNE4-202ENST00000340477 MYO1GB0I1T2 1018 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 TP53I11O14683 189 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 AKAP10O43572 662 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 PEX1O43933 1283 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 COQ9O75208 318 aa17.73■□□□□ 0.43
SYNE4-202ENST00000340477 LRATO95237 230 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms