RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ELK4P28324 431 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 OR1D5P58170 312 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 ZNF555Q8NEP9 628 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 QRSL1Q9H0R6 528 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 ANKHQ9HCJ1 492 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 IRAK4Q9NWZ3 460 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 KIF17Q9P2E2 1029 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 SEC14L3Q9UDX4 400 aa21.06■□□□□ 0.96
PDLIM2-203ENST00000339162 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 APOFQ13790 326 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 SIM2Q14190 667 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 GPAT3Q53EU6 434 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 TRMT12Q53H54 448 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 ZC3H12BQ5HYM0 836 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 PRPF38BQ5VTL8 546 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 KDM4DQ6B0I6 523 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 RBM45Q8IUH3 476 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 ARHGEF39Q8N4T4 335 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 METTL25Q8N6Q8 603 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 VANGL1Q8TAA9 524 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 MOAP1Q96BY2 351 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 GIMAP5Q96F15 307 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 TCTN2Q96GX1 697 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 MRPS26Q9BYN8 205 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 RIBC2Q9H4K1 309 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 THSD1Q9NS62 852 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 EXD2Q9NVH0 621 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 SPACA6W5XKT8 324 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 ASXL3Q9C0F0 2248 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 PPP2R1BP30154 601 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 SOX18P35713 384 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 RAD23AP54725 363 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 TTC23Q5W5X9 447 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 USP53Q70EK8 1073 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 COMTD1Q86VU5 262 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 ZNF607Q96SK3 696 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 EPYCQ99645 322 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 PCDHGA8Q9Y5G5 932 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 A0A0C4DFX4 3053 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 TMEM131Q92545 1883 aa21.05■□□□□ 0.96
PDLIM2-203ENST00000339162 LOC100130705A0A1B0GUX0 176 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 ADAMDEC1O15204 470 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 IFNW1P05000 195 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 PORP16435 677 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 XCR1P46094 333 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 CRISP3P54108 245 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 AMZ1Q400G9 498 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 LIN52Q52LA3 116 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 METTL27Q8N6F8 245 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 APOBEC4Q8WW27 367 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 ZNF347Q96SE7 839 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 HCN3Q9P1Z3 774 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 FRYLO94915 3013 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 B4GAT1O43505 415 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 PDE9AO76083 593 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 EPHA2P29317 976 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 MLLT3P42568 568 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 TPD52P55327 224 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 KCNAB1Q14722 419 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 EXOC3L2Q2M3D2 409 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 PRTGQ2VWP7 1150 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 SLC35F3Q8IY50 421 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 Q8N9G6 341 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 TTC29Q8NA56 475 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 SLC16A11Q8NCK7 471 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 PIK3C3Q8NEB9 887 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 OR4D11Q8NGI4 311 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 PROX1Q92786 737 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 NRBF2Q96F24 287 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 ING2Q9H160 280 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 FSCN3Q9NQT6 498 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 FAM32AQ9Y421 112 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 GPC6Q9Y625 555 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 ENPP4Q9Y6X5 453 aa21.04■□□□□ 0.96
PDLIM2-203ENST00000339162 TP53BP1Q12888 1972 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 CHST10O43529 356 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 DPM1O60762 260 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 OR6B1O95007 311 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 ITGA2P17301 1181 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 RXRGP48443 463 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 MAN2A2P49641 1150 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 MAT1AQ00266 395 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 BNC1Q01954 994 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 EPS8Q12929 822 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 LACC1Q8IV20 430 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 C8orf59Q8N0T1 100 aaPredicted RBP21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 AHCYL2Q96HN2 611 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 PIP5K1AQ99755 562 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 KRT84Q9NSB2 600 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 RLIMQ9NVW2 624 aa21.03■□□□□ 0.96
PDLIM2-203ENST00000339162 SEMA7AO75326 666 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SERPINB7O75635 380 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 CDC123O75794 336 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 GIMD1P0DJR0 217 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 KCNJ5P48544 419 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SEPHS1P49903 392 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SYT16Q17RD7 645 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 LYSMD4Q5XG99 296 aa21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SAMD14Q8IZD0 417 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-203ENST00000339162 SDR16C5Q8N3Y7 309 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms