RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 CDCA4Q9BXL8 241 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 ACTRT3Q9BYD9 372 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 LMAN1LQ9HAT1 526 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 SEMA3GQ9NS98 782 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MED17Q9NVC6 651 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 ATG4BQ9Y4P1 393 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 SLCO1B1Q9Y6L6 691 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 A3GALT2U3KPV4 340 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 LOC102723996A0A087X1L8 192 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 TGFBR3LH3BV60 316 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 PRKD3O94806 890 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 FESP07332 822 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 ACADMP11310 421 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 TSPAN7P41732 249 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 RPL5P46777 297 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 CDK9P50750 372 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 ANXA11P50995 505 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MAPK12P53778 367 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 NR1H2P55055 460 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MXRA7P84157 204 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MVKQ03426 396 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MED21Q13503 144 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 SCARB2Q14108 478 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 DECR1Q16698 335 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 SLX4IPQ5VYV7 408 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 TTC23Q5W5X9 447 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 DUS1LQ6P1R4 473 aaKnown RBP5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 CLIP3Q96DZ5 547 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MED8Q96G25 268 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 HSH2DQ96JZ2 352 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 PRRC1Q96M27 445 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 SNX18Q96RF0 628 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 MAT2BQ9NZL9 334 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 P2RX2Q9UBL9 471 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 PCDHGB4Q9UN71 923 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 ANGPT4Q9Y264 503 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 PCDHGB5Q9Y5G0 923 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 XIRP2A4UGR9 3374 aa5.03□□□□□ -1.6
PRPF4B-201ENST00000337659 TMEM8BA6NDV4 472 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 CLDN24A6NM45 220 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 BRINP1O60477 761 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 WBP4O75554 376 aaKnown RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 TIPRLO75663 272 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 PCDH8O95206 1070 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 THEGLP0DJG4 465 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 ANXA8P13928 327 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 GLB1P16278 677 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 CSNK2A2P19784 350 aaPredicted RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 ZFP36L1Q07352 338 aaKnown RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 RGS1Q08116 209 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 C16orf72Q14CZ0 275 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 TRIP10Q15642 601 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 IFI44LQ53G44 452 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 SLC25A53Q5H9E4 307 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 SYT6Q5T7P8 510 aaPredicted RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 COX15Q7KZN9 410 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 RNF113BQ8IZP6 322 aaKnown RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 BMPERQ8N8U9 685 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 SVIPQ8NHG7 77 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 ZDHHC1Q8WTX9 485 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 IPCEF1Q8WWN9 437 aaPredicted RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 TAPBPLQ9BX59 468 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 OR51B5Q9H339 312 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 SPASTQ9UBP0 616 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 UTS2RQ9UKP6 389 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 POFUT2Q9Y2G5 429 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 TDRKHQ9Y2W6 561 aaKnown RBP5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 IFT52Q9Y366 437 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 PCDHGA8Q9Y5G5 932 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 PCDHGA6Q9Y5G7 932 aa5.03□□□□□ -1.61
PRPF4B-201ENST00000337659 PTPRZ1P23471 2315 aaPredicted RBP5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 PABPN1LA6NDY0 278 aaKnown RBP5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 NPIPB13A6NJU9 1138 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 EVPLLA8MZ36 301 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 NPIPB4C9JG80 1138 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 H0Y8X5 98 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 OR5F1O95221 314 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CBX7O95931 251 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CHRM4P08173 479 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CPMP14384 443 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 ZNF10P21506 573 aaPredicted RBP5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 FNTBP49356 437 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CDK6Q00534 326 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 C2orf80Q0P641 193 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 ILF3Q12906 894 aaKnown RBP eCLIP5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 RPS6KA2Q15349 733 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CTU2Q2VPK5 515 aaKnown RBP5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 LIN52Q52LA3 116 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CDCP2Q5VXM1 449 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 LAIR1Q6GTX8 287 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 CEP68Q76N32 757 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 OOSP2Q86WS3 158 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 ARL14Q8N4G2 192 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 ZNF655Q8N720 491 aaPredicted RBP5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 RNF148Q8N7C7 305 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 OR4D11Q8NGI4 311 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 OR4C6Q8NH72 309 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 RHOXF1Q8NHV9 184 aa5.02□□□□□ -1.61
PRPF4B-201ENST00000337659 PPP1R36Q96LQ0 422 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms