RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 DIRAS1O95057 198 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 ADAP00813 363 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 ASGR2P07307 311 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 GK2Q14410 553 aaPredicted RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 PLEKHO2Q8TD55 490 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 MUS81Q96NY9 551 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 SECISBP2Q96T21 854 aaKnown RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 SYT3Q9BQG1 590 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 EEF1E1O43324 174 aaKnown RBP12.52□□□□□ -0.41
HLCS-201ENST00000336648 ZNF254O75437 659 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 CD9P21926 228 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 CHATP28329 748 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 TXNRD3NBQ6F5E7 133 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 OSTM1Q86WC4 334 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 TREML1Q86YW5 311 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 ACBD7Q8N6N7 88 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 SLC22A8Q8TCC7 542 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 FBRSQ9HAH7 460 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 HRASLS2Q9NWW9 162 aa12.52□□□□□ -0.41
HLCS-201ENST00000336648 MFSD13AQ14CX5 517 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 NPY5RQ15761 445 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 EXOC3L2Q2M3D2 409 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 CES4AQ5XG92 561 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 KANK2Q63ZY3 851 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 RNF111Q6ZNA4 994 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 ZNF619Q8N2I2 560 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 PGAM5Q96HS1 289 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 CERS4Q9HA82 394 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 SGCEO43556 437 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
HLCS-201ENST00000336648 OR8U9P0C7N5 309 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 CYCSP99999 105 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 SPHARQ15513 63 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 SLC35F1Q5T1Q4 408 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 TMEM236Q5W0B7 351 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 CPT1CQ8TCG5 803 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 ITPKCQ96DU7 683 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 PRMT8Q9NR22 394 aaPredicted RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 PPP4R1LQ9P1A2 415 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 BACE2Q9Y5Z0 518 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 PIRO00625 290 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 HCRTR2O43614 444 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 FCER2P06734 321 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 GABRA3P34903 492 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 EIF4HQ15056 248 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 XKR5Q6UX68 686 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 DPY19L3Q6ZPD9 716 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 MRPL41Q8IXM3 137 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 MGLLQ99685 303 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 PDE7BQ9NP56 450 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 CLDND1Q9NY35 253 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 GMEB2Q9UKD1 530 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 CFAP20Q9Y6A4 193 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 OR12D1P0DN82 309 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 PRKCAP17252 672 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 ART1P52961 327 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 OGDHQ02218 1023 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 NIPAL4Q0D2K0 466 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 PLCXD2Q0VAA5 305 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 SNTB2Q13425 540 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 ZNF689Q96CS4 500 aaPredicted RBP12.51□□□□□ -0.41
HLCS-201ENST00000336648 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 DEFB126Q9BYW3 111 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 RPS10P5Q9NQ39 176 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 ASF1BQ9NVP2 202 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 TMEM98Q9Y2Y6 226 aa12.51□□□□□ -0.41
HLCS-201ENST00000336648 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 OR6C65A6NJZ3 312 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 E7ESA3 106 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 WDPCPO95876 746 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 GCGRP47871 477 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 SLC11A1P49279 550 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 PRKXP51817 358 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 SPATC1Q76KD6 591 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 SCML4Q8N228 414 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 BEST4Q8NFU0 473 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 OR2T4Q8NH00 348 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 OR52P1PQ8NH57 321 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 KCNA7Q96RP8 456 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 WDR77Q9BQA1 342 aaPredicted RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 POLE4Q9NR33 117 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 KCTD3Q9Y597 815 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 DENRO43583 198 aaKnown RBP12.5□□□□□ -0.41
HLCS-201ENST00000336648 JRKO75564 520 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 ENTPD1P49961 510 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 CLDN8P56748 225 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 NPRL3Q12980 569 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 TEAD2Q15562 447 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 MANEALQ5VSG8 457 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 GDPGP1Q6ZNW5 385 aa12.5□□□□□ -0.41
HLCS-201ENST00000336648 ZNF578Q96N58 590 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms