RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CLPXO76031 633 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 MYF6P23409 242 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 KIAA0040Q15053 153 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 PLK5Q496M5 336 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 ADCK1Q86TW2 530 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 C19orf47Q8N9M1 422 aaKnown RBP14.99□□□□□ -0.01
PDGFB-201ENST00000331163 PSMA8Q8TAA3 256 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 SLC47A1Q96FL8 570 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 SLC35C2Q9NQQ7 365 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 SNX5Q9Y5X3 404 aa14.99□□□□□ -0.01
PDGFB-201ENST00000331163 PIEZO1Q92508 2521 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 A0A1W2PR48 441 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 KHNYNO15037 678 aaKnown RBP14.98□□□□□ -0.01
PDGFB-201ENST00000331163 ERN1O75460 977 aaKnown RBP14.98□□□□□ -0.01
PDGFB-201ENST00000331163 MAOAP21397 527 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SPCS2Q15005 226 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 ZIC1Q15915 447 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 VWA2Q5GFL6 755 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 TBPL2Q6SJ96 375 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 C6orf120Q7Z4R8 191 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 C11orf65Q8NCR3 313 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 GPBAR1Q8TDU6 330 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 MS4A6EQ96DS6 147 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SLC25A37Q9NYZ2 338 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 UGDHO60701 494 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 TMEM236Q5W0B7 351 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 PLXDC1Q8IUK5 500 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 CLIP4Q8N3C7 705 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 METTL4Q8N3J2 472 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 ANKFN1Q8N957 763 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 ABHD11Q8NFV4 315 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SLC35G5Q96KT7 338 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 OR6C1Q96RD1 312 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 MKL2Q9ULH7 1088 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 ORC6Q9Y5N6 252 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 PIEZO2Q9H5I5 2752 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 KCNE1BA0A087WTH5 132 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 CLDN4O14493 209 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SUV39H1O43463 412 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 GPR37L1O60883 481 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SNRPNP63162 240 aaKnown RBP14.98□□□□□ -0.01
PDGFB-201ENST00000331163 KCNJ8Q15842 424 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 MEP1AQ16819 746 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 GCNT6Q5T4J0 391 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 DHRS4L2Q6PKH6 230 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 VN1R5Q7Z5H4 357 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 PRR22Q8IZ63 422 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 ALDH16A1Q8IZ83 802 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 CADM3Q8N126 398 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 C10orf111Q8N326 155 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 UTP15Q8TED0 518 aaKnown RBP14.98□□□□□ -0.01
PDGFB-201ENST00000331163 CHPT1Q8WUD6 406 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 CHTF18Q8WVB6 975 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 TM4SF18Q96CE8 201 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SERTAD3Q9UJW9 196 aa14.98□□□□□ -0.01
PDGFB-201ENST00000331163 SAMHD1Q9Y3Z3 626 aaKnown RBP14.98□□□□□ -0.01
PDGFB-201ENST00000331163 FXYD1O00168 92 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 DLGAP1O14490 977 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 NADKO95544 446 aaPredicted RBP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 DLGAP3O95886 979 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 PIK3CBP42338 1070 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 BTG2P78543 158 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 SF3B4Q15427 424 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 NDUFA9Q16795 377 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 ABHD17CQ6PCB6 329 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 OR4K14Q8NGD5 310 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 STARD8Q92502 1023 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 PRR14Q9BWN1 585 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 RIBC2Q9H4K1 309 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 PELI2Q9HAT8 420 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 CCM2LQ9NUG4 571 aaPredicted RBP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 EVA1BQ9NVM1 165 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 CLCA3PQ9Y6N3 262 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 K7ESF4 209 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 CHST10O43529 356 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 CREG1O75629 220 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 BMP2P12643 396 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 REEP5Q00765 189 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 SCARB2Q14108 478 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 AGERQ15109 404 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 SLC36A3Q495N2 470 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 BROXQ5VW32 411 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 ANKRD34AQ69YU3 496 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 DTWD2Q8NBA8 298 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 SIMC1Q8NDZ2 872 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 SMURF2Q9HAU4 748 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 ADPRHL2Q9NX46 363 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 MRPS33Q9Y291 106 aaKnown RBP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 FREM2Q5SZK8 3169 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 CLDN25C9JDP6 229 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 KCNJ13O60928 360 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 MPLP40238 635 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 TRAP1Q12931 704 aaKnown RBP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 INAQ16352 499 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 ZC3H12BQ5HYM0 836 aaKnown RBP14.97□□□□□ -0.01
PDGFB-201ENST00000331163 HLA-DQA1Q5Y7H0 255 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 CDC73Q6P1J9 531 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 SCAIQ8N9R8 606 aa14.97□□□□□ -0.01
PDGFB-201ENST00000331163 PROX1Q92786 737 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms