RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SLC29A1Q99808 456 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 BATF3Q9NR55 127 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 GPATCH2Q9NW75 528 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 PISDQ9UG56 409 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 RPS6KA6Q9UK32 745 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 SEC16AO15027 2179 aa17.62■□□□□ 0.41
EXOSC3-201ENST00000327304 CYR61O00622 381 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 TNFRSF21O75509 655 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 JMJD7P0C870 316 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 PCGF2P35227 344 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 MANFP55145 182 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 RAB38P57729 211 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 TARDBPQ13148 414 aaKnown RBP eCLIP17.61■□□□□ 0.411e-7■■■□□ 15
EXOSC3-201ENST00000327304 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 FAM180BQ6P0A1 224 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 EPHX4Q8IUS5 362 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 CLEC4FQ8N1N0 589 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 MARVELD2Q8N4S9 558 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 C11orf65Q8NCR3 313 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 TMEM52Q8NDY8 209 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 PSMA8Q8TAA3 256 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 CLIP3Q96DZ5 547 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 RBCK1Q9BYM8 510 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 TMEM38AQ9H6F2 299 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 EPS8L2Q9H6S3 715 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 ZNF639Q9UID6 485 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 CDC14AQ9UNH5 594 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 FAF1Q9UNN5 650 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 B3GALT1Q9Y5Z6 326 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 AP4B1Q9Y6B7 739 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 KNTC1P50748 2209 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 MAGEA13PA6NCF6 341 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 SAC3D1A6NKF1 404 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 SOCS2O14508 198 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 PLD2O14939 933 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 ACOX3O15254 700 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 CHI3L1P36222 383 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 BUD31P41223 144 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 MRPS35P82673 323 aaKnown RBP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 NKG7Q16617 165 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 NRF1Q16656 503 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 PEX11GQ96HA9 241 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 DPH2Q9BQC3 489 aaPredicted RBP17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 OSBPL11Q9BXB4 747 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 CXorf36Q9H7Y0 433 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 SLAMF7Q9NQ25 335 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 MS4A12Q9NXJ0 267 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 OAZ3Q9UMX2 235 aa17.61■□□□□ 0.41
EXOSC3-201ENST00000327304 C7orf72A4D263 438 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 RASAL1O95294 804 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 RNH1P13489 461 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 FBLP22087 321 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CRATP43155 626 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 DSG2Q14126 1118 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 C3orf38Q5JPI3 329 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 ANGPTL8Q6UXH0 198 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CEACAM20Q6UY09 585 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CBLL1Q75N03 491 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 EIF3MQ7L2H7 374 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 TMPRSS12Q86WS5 348 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CBR4Q8N4T8 237 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 OR51Q1Q8NH59 317 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 COL26A1Q96A83 441 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 EXOSC8Q96B26 276 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CLK4Q9HAZ1 481 aaKnown RBP17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 ZNF304Q9HCX3 659 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 DLL3Q9NYJ7 618 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 DNAJB9Q9UBS3 223 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CES1P1Q9UKY3 287 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 SPACA6W5XKT8 324 aa17.6■□□□□ 0.41
EXOSC3-201ENST00000327304 CPNE3O75131 537 aaKnown RBP17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 MT-ND1P03886 318 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 HBQ1P09105 142 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 TLX1P31314 330 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 SOAT1P35610 550 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 MAGEA2P43356 314 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 RAB15P59190 212 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 EIF3IQ13347 325 aaKnown RBP17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 BLMHQ13867 455 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 LRRC23Q53EV4 343 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 GCNT6Q5T4J0 391 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 DCAF12Q5T6F0 453 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 ARHGAP40Q5TG30 622 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 ZNF385CQ66K41 422 aaPredicted RBP17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC48A1Q6P1K1 146 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 WDR36Q8NI36 951 aaKnown RBP17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 NEURL3Q96EH8 262 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 NTN4Q9HB63 628 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC35C2Q9NQQ7 365 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 SLC22A11Q9NSA0 550 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 UTS2RQ9UKP6 389 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 SATB2Q9UPW6 733 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 SCN2AQ99250 2005 aa17.59■□□□□ 0.41
EXOSC3-201ENST00000327304 RNF103-CHMP3A0A140T963 221 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 UPK1AO00322 258 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 NUDT7P0C024 238 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 ETFAP13804 333 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 RORAP35398 523 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 XCR1P46094 333 aa17.58■□□□□ 0.41
EXOSC3-201ENST00000327304 ELOAQ14241 798 aaKnown RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms