RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TCEAL8Q8IYN2 117 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 TNFAIP8L1Q8WVP5 186 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 SRMSQ9H3Y6 488 aa14.52□□□□□ -0.09
VARS2-201ENST00000321897 TPRP12270 2363 aaKnown RBP14.52□□□□□ -0.09
VARS2-201ENST00000321897 POM121CA8CG34 1229 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ANHXE9PGG2 379 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 M0R233 179 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 AKR7A2O43488 359 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ITPKBP27987 946 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SLC3A1Q07837 685 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 RGS1Q08116 209 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 PDGFRLQ15198 375 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ZNF852Q6ZMS4 543 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 OXR1Q8N573 874 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 NATD1Q8N6N6 113 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 FAM98AQ8NCA5 519 aaKnown RBP14.51□□□□□ -0.09
VARS2-201ENST00000321897 HMGB4Q8WW32 186 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ASB11Q8WXH4 323 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TMEM80Q96HE8 168 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 PDFQ9HBH1 243 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TAS2R7Q9NYW3 318 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SLC25A37Q9NYZ2 338 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 CACNG3O60359 315 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 MPZL2O60487 215 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SOX30O94993 753 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SOX9P48436 509 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 EFR3AQ14156 821 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 RGNQ15493 299 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ODF4Q2M2E3 257 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 COX20Q5RI15 118 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 LINGO2Q7L985 606 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 C6orf120Q7Z4R8 191 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TOMM5Q8N4H5 51 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 DNAJC5GQ8N7S2 189 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ERMAPQ96PL5 475 aaPredicted RBP14.51□□□□□ -0.09
VARS2-201ENST00000321897 SNX18Q96RF0 628 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 CCDC32Q9BV29 185 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SPATA5L1Q9BVQ7 753 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SPATA9Q9BWV2 254 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 HMX3A6NHT5 357 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 PCDH17O14917 1159 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TSPAN12O95859 305 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 MRPL3P09001 348 aaKnown RBP14.51□□□□□ -0.09
VARS2-201ENST00000321897 ZNF806P0C7X5 589 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ADORA3P0DMS8 318 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 APEX1P27695 318 aaKnown RBP14.51□□□□□ -0.09
VARS2-201ENST00000321897 GINS1Q14691 196 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ZNF311Q5JNZ3 666 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 REEP3Q6NUK4 255 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TMEM107Q6UX40 140 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ZNF367Q7RTV3 350 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TAF8Q7Z7C8 310 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 NEIL3Q8TAT5 605 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 OVCA2Q8WZ82 227 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TMEM19Q96HH6 336 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 FUZQ9BT04 418 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 MND1Q9BWT6 205 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 TTLL2Q9BWV7 592 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 KLHL31Q9H511 634 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 CUEDC1Q9NWM3 386 aaPredicted RBP14.51□□□□□ -0.09
VARS2-201ENST00000321897 WASHC1A8K0Z3 465 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 SCAMP2O15127 329 aaKnown RBP14.51□□□□□ -0.09
VARS2-201ENST00000321897 METAP1P53582 386 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 ZMAT1Q5H9K5 638 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 LIPJQ5W064 366 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 FAM205BPQ63HN1 556 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 WASH2PQ6VEQ5 465 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 FAM46DQ8NEK8 389 aa14.51□□□□□ -0.09
VARS2-201ENST00000321897 DOCK1Q14185 1865 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CEP250Q9BV73 2442 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 L7N2F9 121 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 PRMT3O60678 531 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 SCN2BO60939 215 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 ALX3O95076 343 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 F11P03951 625 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CLEC2LP0C7M8 214 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 POLR2CP19387 275 aaPredicted RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 CR2P20023 1033 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CRISP3P54108 245 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 SLC35A2P78381 396 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 LIPIQ6XZB0 460 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 ZNF655Q8N720 491 aaPredicted RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 PKMYT1Q99640 499 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 TM9SF2Q99805 663 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 DPH7Q9BTV6 452 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 GTPBP2Q9BX10 602 aaKnown RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 CLMPQ9H6B4 373 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 NTN4Q9HB63 628 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 PPT2Q9UMR5 302 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CA5BQ9Y2D0 317 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CYP17A1P05093 508 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 MYOGP15173 224 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 TIMP2P16035 220 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 CEBPBP17676 345 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 TGFBR2P37173 567 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 PIK3CBP42338 1070 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 SMIM11AP58511 58 aa14.5□□□□□ -0.09
VARS2-201ENST00000321897 POU6F2P78424 691 aaPredicted RBP14.5□□□□□ -0.09
VARS2-201ENST00000321897 KCNC4Q03721 635 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms