RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PDK1Q15118 436 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 MAPK11Q15759 364 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 KIF19Q2TAC6 998 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ETFRF1Q6IPR1 90 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 MCOLN2Q8IZK6 566 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 OR5B17Q8NGF7 314 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 OR13A1Q8NGR1 328 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF564Q8TBZ8 553 aaPredicted RBP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF606Q8WXB4 792 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 KRT12Q99456 494 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 DDX50Q9BQ39 737 aaKnown RBP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 GCOM2Q9BZD3 368 aaPredicted RBP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ABCG8Q9H221 673 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 DDX31Q9H8H2 851 aaKnown RBP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 EVA1AQ9H8M9 152 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ACP6Q9NPH0 428 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 PRMT8Q9NR22 394 aaPredicted RBP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 TAAR2Q9P1P5 351 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 IL19Q9UHD0 177 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 ITM2BQ9Y287 266 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 RPH3AQ9Y2J0 694 aaPredicted RBP3.63□□□□□ -1.83
SMCO3-201ENST00000316048 LRRC37A2A6NM11 1700 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 PTPRJQ12913 1337 aa3.63□□□□□ -1.83
SMCO3-201ENST00000316048 A0A087X0K7 114 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 A0A1B0GUA9 196 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 C2orf81A6NN90 581 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TMEM110-MUSTN1A8MSY1 372 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 LACTBL1A8MY62 500 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TMEM150CB9EJG8 249 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 C16orf97H3BN30 126 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CACNB4O00305 520 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 B4GALT5O43286 388 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SMAD6O43541 496 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SPOPO43791 374 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 LSM8O95777 96 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FGGP02679 453 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 VTNP04004 478 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 EDN1P05305 212 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CALB1P05937 261 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 IQCF3P0C7M6 154 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FRMD6-AS1P0C7T7 363 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CD59P13987 128 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 AXLP30530 894 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CSTF2P33240 577 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PEX19P40855 299 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CETN2P41208 172 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 LUMP51884 338 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ART1P52961 327 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 RWDD2BP57060 319 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PITX1P78337 314 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 GALK2Q01415 458 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 GUCY2DQ02846 1103 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 KLC1Q07866 573 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SMC1AQ14683 1233 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZKSCAN8Q15776 578 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 EXT1Q16394 746 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 IZUMO4Q1ZYL8 232 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF699Q32M78 642 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 DCAF4L1Q3SXM0 396 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FUT11Q495W5 492 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 MARCH8Q5T0T0 291 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SEL1L2Q5TEA6 688 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SPOPLQ6IQ16 392 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 EMBQ6PCB8 327 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CDR2LQ86X02 465 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PHF13Q86YI8 300 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 EIF1ADQ8N9N8 165 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TMEM35BQ8NCS4 154 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 MAIP1Q8WWC4 291 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CKAP2Q8WWK9 683 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZBTB9Q96C00 473 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SENP5Q96HI0 755 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ST6GAL2Q96JF0 529 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ZNF560Q96MR9 790 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 RUFY1Q96T51 708 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ALKBH7Q9BT30 221 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SPXQ9BT56 116 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 MTMR12Q9C0I1 747 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 GOLPH3Q9H4A6 298 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FAM124BQ9H5Z6 455 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 GDF3Q9NR23 364 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 FGF21Q9NSA1 209 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CISHQ9NSE2 258 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PARVAQ9NVD7 372 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 OR6C2Q9NZP2 312 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 ADAM22Q9P0K1 906 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 CHKBQ9Y259 395 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TDRKHQ9Y2W6 561 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TMED7Q9Y3B3 224 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PCSK5Q92824 1860 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PLXNB2O15031 1838 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 SIP14410 1827 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 MYH10P35580 1976 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PLXNA1Q9UIW2 1896 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TRAV18A0A075B6X5 111 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TRIM64CA6NLI5 447 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 TLR4O00206 839 aa3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PRKRAO75569 313 aaKnown RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 APOHP02749 345 aaPredicted RBP3.62□□□□□ -1.83
SMCO3-201ENST00000316048 PAEPP09466 180 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms