RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MMP25Q9NPA2 562 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 SLC35C2Q9NQQ7 365 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 GIMAP4Q9NUV9 329 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ANKRD10Q9NXR5 420 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 SH3BP4Q9P0V3 963 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 PSME2Q9UL46 239 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 ENTPD4Q9Y227 616 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 EIF3LQ9Y262 564 aaKnown RBP7.31□□□□□ -1.24
CDC42-201ENST00000315554 TMED5Q9Y3A6 229 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 CHD6Q8TD26 2715 aa7.31□□□□□ -1.24
CDC42-201ENST00000315554 TRPC5OSA6NMA1 111 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 GABRR3A8MPY1 467 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SLCO1B7G3V0H7 640 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 WWP2O00308 870 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 WDPCPO95876 746 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 CLPSP04118 112 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 PRPS2P11908 318 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 PCSK2P16519 638 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SOX18P35713 384 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 HPCAL1P37235 193 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 CLCN2P51788 898 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 NCBP2P52298 156 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDC42-201ENST00000315554 AQP5P55064 265 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SOX8P57073 446 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 EMX2Q04743 252 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 MGAT2Q10469 447 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 HSPB3Q12988 150 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 DUSP8Q13202 625 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 TERF2Q15554 542 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 MPEG1Q2M385 716 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 NADK2Q4G0N4 442 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 TRMT12Q53H54 448 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 CRB2Q5IJ48 1285 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ACER2Q5QJU3 275 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 C6orf163Q5TEZ5 329 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 TCTN3Q6NUS6 607 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ISLR2Q6UXK2 745 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 IKBIPQ70UQ0 350 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 LARP4Q71RC2 724 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDC42-201ENST00000315554 ZNF551Q7Z340 670 aaPredicted RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 C9orf40Q8IXQ3 194 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 KIRREL3Q8IZU9 778 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 BEST3Q8N1M1 668 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 LRRC25Q8N386 305 aaPredicted RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 ARFGAP2Q8N6H7 521 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 MORN4Q8NDC4 146 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 CATSPER1Q8NEC5 780 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 OR1N1Q8NGS0 311 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 RFWD2Q8NHY2 731 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SUN3Q8TAQ9 357 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 METTL2AQ96IZ6 378 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 GAL3ST4Q96RP7 486 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SMAD5Q99717 465 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 EBF4Q9BQW3 602 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 PELOQ9BRX2 385 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SLC25A18Q9H1K4 315 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 REEP4Q9H6H4 257 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 NPHS2Q9NP85 383 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SLAMF7Q9NQ25 335 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 MAT2BQ9NZL9 334 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 NOP53Q9NZM5 478 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 BCAP29Q9UHQ4 241 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 PCDHGA9Q9Y5G4 932 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 MYO1GB0I1T2 1018 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 E9PBE3 544 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SCAMP2O15127 329 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 PDPK1O15530 556 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 DYRK3O43781 588 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 KLHL41O60662 606 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 EDF1O60869 148 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 VPS4BO75351 444 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ZFAND5O76080 213 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ALPPP05187 535 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 VIMP08670 466 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 LAMP1P11279 417 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 NTSP30990 170 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 GSTM5P46439 218 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ASMTP46597 345 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 IDH3AP50213 366 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 UFM1P61960 85 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ARG2P78540 354 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 MAD2L1Q13257 205 aaPredicted RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 MFAP5Q13361 173 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 NNATQ16517 81 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 SPRED3Q2MJR0 410 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 PRICKLE4Q2TBC4 344 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 PGS1Q32NB8 556 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 LSM12Q3MHD2 195 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 ZNF628Q5EBL2 1059 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 ZNF468Q5VIY5 522 aaPredicted RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 ABHD17BQ5VST6 288 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 JMJD6Q6NYC1 403 aaPredicted RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 EPGNQ6UW88 154 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 TMEM107Q6UX40 140 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 TMEM64Q6YI46 380 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 HSDL2Q6YN16 418 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 RNF111Q6ZNA4 994 aa7.3□□□□□ -1.24
CDC42-201ENST00000315554 RPS19BP1Q86WX3 136 aaKnown RBP7.3□□□□□ -1.24
CDC42-201ENST00000315554 FAM9CQ8IZT9 166 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms