RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PDZD3Q86UT5 571 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ELMOD2Q8IZ81 293 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ZMIZ2Q8NF64 920 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 C12orf10Q9HB07 376 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CHD3Q12873 2000 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 KIAA0513O60268 411 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 OR1I1O60431 355 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 UPP2O95045 317 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 FMO3P31513 532 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 HBMQ6B0K9 141 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 OR6Q1Q8NGQ2 317 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 PEBP4Q96S96 227 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GMLQ99445 158 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 KCNK13Q9HB14 408 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 NKIRAS2Q9NYR9 191 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 WASF3Q9UPY6 502 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 NOP16Q9Y3C1 178 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM200CA6NKL6 621 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SLC43A1O75387 559 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 B3GALNT1O75752 331 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SULT1C4O75897 302 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 PRH1P02810 166 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TPT1P13693 172 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 PRPH2P23942 346 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GABRR2P28476 465 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 C1orf220Q5T0J3 134 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MAP1SQ66K74 1059 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM220Q6QAJ8 160 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 OR5L2Q8NGL0 311 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GLYATL1Q969I3 302 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ARL5BQ96KC2 179 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TBL1XR1Q9BZK7 514 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MKRN2Q9H000 416 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RERGLQ9H628 205 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 B3GNT2Q9NY97 397 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CDRT1O95170 752 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MT-CO2P00403 227 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GXYLT1Q4G148 440 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TCTE1Q5JU00 501 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 CXCL17Q6UXB2 119 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SLC9B2Q86UD5 537 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 FCRL3Q96P31 734 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 LYSMD1Q96S90 227 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RNF38Q9H0F5 515 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ZNF275Q9NSD4 429 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SLC17A6Q9P2U8 582 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 hCG_2039718K7EN88 272 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TAS2R46P59540 309 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 OCLNQ16625 522 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RGMBQ6NW40 437 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RPL22L1Q6P5R6 122 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MISPQ8IVT2 679 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 OR6V1Q8N148 313 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 OR1J4Q8NGS1 313 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TCTEX1D2Q8WW35 142 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 COL26A1Q96A83 441 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RBP7Q96R05 134 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 DUS2Q9NX74 493 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 KLHL13Q9P2N7 655 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MKL2Q9ULH7 1088 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TMEM129A0AVI4 362 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 C2orf74A8MZ97 194 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TPD52L2O43399 206 aaKnown RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 MAOAP21397 527 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 ITPKAP23677 461 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 RAB28P51157 221 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 VAMP2P63027 116 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 SF3B4Q15427 424 aaKnown RBP eCLIP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 C1orf189Q5VU69 101 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GTF2IRD2BQ6EKJ0 949 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 FAM199XQ6PEV8 388 aaPredicted RBP8.42□□□□□ -1.06
COL6A5-202ENST00000312481 GTF2IRD2Q86UP8 949 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TICAM1Q8IUC6 712 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 DGAT2Q96PD7 388 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TM6SF2Q9BZW4 377 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 KCNIP2Q9NS61 270 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 TBC1D24Q9ULP9 559 aa8.42□□□□□ -1.06
COL6A5-202ENST00000312481 BRWD1Q9NSI6 2320 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 NLRC5Q86WI3 1866 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 UNC119BA6NIH7 251 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 NARSO43776 548 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 OR2T1O43869 369 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 SOD2P04179 222 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ALPIP09923 528 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 HSF5Q4G112 596 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 Q6ZNX1 250 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 MARCH9Q86YJ5 346 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FUBP1Q96AE4 644 aaKnown RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 HSPBAP1Q96EW2 488 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 ZDHHC12Q96GR4 267 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 CDCA4Q9BXL8 241 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 IL20Q9NYY1 176 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 FBXO10Q9UK96 956 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 RIPK3Q9Y572 518 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 INSL6Q9Y581 213 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 DDCP20711 480 aa8.41□□□□□ -1.06
COL6A5-202ENST00000312481 DBPQ10586 325 aaPredicted RBP8.41□□□□□ -1.06
COL6A5-202ENST00000312481 NIPAL3Q6P499 406 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms