RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 PPP1R3BQ86XI6 285 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 MCATQ8IVS2 390 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 DDIASQ8IXT1 998 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 C10orf67Q8IYJ2 551 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PTGR2Q8N8N7 351 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 TCP10LQ8TDR4 215 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 GFM2Q969S9 779 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 PMEPA1Q969W9 287 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 TLCD1Q96CP7 247 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CCDC126Q96EE4 140 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 L3HYPDHQ96EM0 354 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 NEIL1Q96FI4 390 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 CHMP6Q96FZ7 201 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 RAB3IPQ96QF0 476 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 ERVK-6Q9BXR3 956 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 C12orf65Q9H3J6 166 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 CENPHQ9H3R5 247 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PELI2Q9HAT8 420 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 H2AFY2Q9P0M6 372 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 OPTCQ9UBM4 332 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SERTAD3Q9UJW9 196 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 RARRES3Q9UL19 164 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 DYRK1BQ9Y463 629 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 B3GALT1Q9Y5Z6 326 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 APC2O95996 2303 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 TRBC2A0A5B9 178 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 FITM1A5D6W6 292 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ANKRD34BA5PLL1 514 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 TMEM150CB9EJG8 249 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 E7EQ34 232 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 EREGO14944 169 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PRPF4O43172 522 aaKnown RBP eCLIP7.78□□□□□ -1.163e-7■■□□□ 12.9
CHD6-201ENST00000309279 LCMT2O60294 686 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 UGDHO60701 494 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SPAG7O75391 227 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SASH3O75995 380 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 C1GALT1C1LP0DN25 315 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 MYL2P10916 166 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CPA3P15088 417 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 IMPDH1P20839 514 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PTAFRP25105 342 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 RBMS1P29558 406 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 GRK3P35626 688 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PSMB10P40306 273 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PIK3CGP48736 1102 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SLC18A1P54219 525 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ITGA1P56199 1179 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 DNAJB13P59910 316 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 RPS15AP62244 130 aaKnown RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 S100A12P80511 92 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 LGALS3BPQ08380 585 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 GTF2H2Q13888 395 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CBFBQ13951 182 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ZNF678Q5SXM1 525 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 RIPPLY2Q5TAB7 128 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 AGBL2Q5U5Z8 902 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 GTF2H2CQ6P1K8 395 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 FOXR1Q6PIV2 292 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ZNF680Q8NEM1 530 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 BBS1Q8NFJ9 593 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 OR1L3Q8NH93 324 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 AKR7LQ8NHP1 331 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 DNAJA4Q8WW22 397 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 MED30Q96HR3 178 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 CEP19Q96LK0 163 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ZNF578Q96N58 590 aaPredicted RBP7.78□□□□□ -1.16
CHD6-201ENST00000309279 CTRCQ99895 268 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SLC5A7Q9GZV3 580 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SYNPO2LQ9H987 977 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ZBTB26Q9HCK0 441 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 THSD1Q9NS62 852 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 ZNF446Q9NWS9 450 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 OXSMQ9NWU1 459 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 TAS2R7Q9NYW3 318 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 SLC17A7Q9P2U7 560 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 PCTPQ9UKL6 214 aa7.78□□□□□ -1.16
CHD6-201ENST00000309279 FER1L5A0AVI2 2057 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 IGF2RP11717 2491 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 LOC105369274A0A096LPK9 316 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 LOC102723532A0A0G2JNH3 316 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 A0A0J9YVX5 310 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 H0YGG7 62 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 PCDH17O14917 1159 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 TM9SF1O15321 606 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 RHBDL1O75783 438 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 TIAF1O95411 115 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 CTSBP07858 339 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 AHCYP23526 432 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 CXCR2P25025 360 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 CD82P27701 267 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 SLC5A2P31639 672 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 AHRP35869 848 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 EMP3P54852 163 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 MAGOHP61326 146 aaKnown RBP7.77□□□□□ -1.17
CHD6-201ENST00000309279 NAA20P61599 178 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 REEP5Q00765 189 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 DEFB110Q30KQ9 67 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 UNC50Q53HI1 259 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 MANEAQ5SRI9 462 aa7.77□□□□□ -1.17
CHD6-201ENST00000309279 SPATA46Q5T0L3 261 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms