RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 GPR4P46093 362 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 SF3A2Q15428 464 aaKnown RBP12.79□□□□□ -0.36
SEC23A-201ENST00000307712 GARNL3Q5VVW2 1013 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 SLC25A25Q6KCM7 469 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 CCDC116Q8IYX3 515 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 UBTD2Q8WUN7 234 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 GAL3ST1Q99999 423 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 C17orf62Q9BQA9 187 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 GABARAPL3Q9BY60 117 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 ZNF69Q9UC07 566 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 SIPA1L1O43166 1804 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 FXYD6-FXYD2A0A087WZ82 144 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 GNB5O14775 395 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 ERI3O43414 337 aaKnown RBP12.79□□□□□ -0.36
SEC23A-201ENST00000307712 F8A1P23610 371 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 SLC9A5Q14940 896 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 GPR68Q15743 365 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 DUSP7Q16829 419 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 IL20RBQ6UXL0 311 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 CCDC190Q86UF4 302 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 CBARPQ8N350 705 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-201ENST00000307712 RPLP0P6Q8NHW5 317 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 TFGQ92734 400 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-201ENST00000307712 GLYATL1Q969I3 302 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 MCHR1Q99705 422 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 FXYD6Q9H0Q3 95 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 B4DXG7 233 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 EIF3FO00303 357 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-201ENST00000307712 ADAM12O43184 909 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 ARSBP15848 533 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 PTPN2P17706 415 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 OMPP47874 163 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 CTBP2P56545 445 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 AKIRIN2Q53H80 203 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 CREB3L1Q96BA8 519 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 MED30Q96HR3 178 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 SCLYQ96I15 445 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 FAM46AQ96IP4 442 aaKnown RBP12.79□□□□□ -0.36
SEC23A-201ENST00000307712 OR2A14Q96R47 310 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 KATNBL1Q9H079 304 aa12.79□□□□□ -0.36
SEC23A-201ENST00000307712 CACNA1CQ13936 2221 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 INPPL1O15357 1258 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 FABP7O15540 132 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 HPGDP15428 266 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 ZNF30P17039 623 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CCR8P51685 355 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 AP3S2P59780 193 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 DEFA5Q01523 94 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 GGTA1PQ4G0N0 100 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 SFRP4Q6FHJ7 346 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 PODNL1Q6PEZ8 512 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 FRRS1Q6ZNA5 592 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 FTMTQ8N4E7 242 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 OR4F15Q8NGB8 312 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 TRIB2Q92519 343 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 OSTF1Q92882 214 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 ADAP2Q9NPF8 381 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 ACER3Q9NUN7 267 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 HYKKA2RU49 373 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CCL16O15467 120 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 TEX28O15482 410 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 NUPL2O15504 423 aaKnown RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 UGDHO60701 494 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 LEFTY1O75610 366 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 REM1O75628 298 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 H2AFB2P0C5Z0 115 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 ARAFP10398 606 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CSNK2A2P19784 350 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 TLX1P31314 330 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CTSOP43234 321 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 GCGRP47871 477 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 MRPL19P49406 292 aaKnown RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 RRAS2P62070 204 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 AMZ2Q86W34 360 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 KIF18BQ86Y91 864 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 ACBD7Q8N6N7 88 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 SRFBP1Q8NEF9 429 aaKnown RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 OR5D16Q8NGK9 328 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 GNPDA2Q8TDQ7 276 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 SUSD6Q92537 303 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 RRAGCQ9HB90 399 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 NANSQ9NR45 359 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CALML5Q9NZT1 146 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 COMMD9Q9P000 198 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 NDRG2Q9UN36 371 aaKnown RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 IRAK3Q9Y616 596 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 CSNK1G3Q9Y6M4 447 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 TBC1D3BA6NDS4 549 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 PRODHO43272 600 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 PYCR1P32322 319 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 EVI2BP34910 448 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 MLLT3P42568 568 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 THAP7Q9BT49 309 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-201ENST00000307712 ARHGAP39Q9C0H5 1083 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 BRF2Q9HAW0 419 aa12.78□□□□□ -0.36
SEC23A-201ENST00000307712 THSD1Q9NS62 852 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms