RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 SHMT2P34897 504 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 SOX3P41225 446 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ALDH3B2P48448 385 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 SEC13P55735 322 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 FXYD6P3P58550 94 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 OCLNQ16625 522 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 GXYLT1Q4G148 440 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 GRHL2Q6ISB3 625 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 C16orf78Q8WTQ4 265 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 WDR6Q9NNW5 1121 aaKnown RBP12.26□□□□□ -0.45
COL3A1-201ENST00000304636 NPAP1Q9NZP6 1156 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 ATPIF1Q9UII2 106 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 CACNG2Q9Y698 323 aa12.26□□□□□ -0.45
COL3A1-201ENST00000304636 FMO6PO60774 539 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 PPM1BO75688 479 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 GJB5O95377 273 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 SNAI1O95863 264 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 ALDOCP09972 364 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 TNFRSF1BP20333 461 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 BLKP51451 505 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 PDGFRLQ15198 375 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 FLYWCH1Q4VC44 716 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 ANKK1Q8NFD2 765 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 OR51A7Q8NH64 312 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 TRMT10AQ8TBZ6 339 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM41AQ96HV5 264 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 SYT4Q9H2B2 425 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 RHPN2P1A8MT19 583 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 CAPNS1P04632 268 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 HCKP08631 526 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 S1PR1P21453 382 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 PHOSPHO1Q8TCT1 267 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF689Q96CS4 500 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 MKRN2Q9H000 416 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 EDARQ9UNE0 448 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM14AQ9Y6G1 99 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 COL2A1P02458 1487 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 BORCS7-ASMTA0A0B4J1R7 106 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 ACOT8O14734 319 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 GPR37L1O60883 481 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 HOXA11P31270 313 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 RORAP35398 523 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 RBMXP38159 391 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 NAA10P41227 235 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF791Q3KP31 576 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 METTL11BQ5VVY1 283 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 KCTD18Q6PI47 426 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 DGLUCYQ7Z3D6 616 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 METTL4Q8N3J2 472 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 TOR1AIP2Q8NFQ8 470 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 OR4E2Q8NGC2 313 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 SNAPC3Q92966 411 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 CPNE2Q96FN4 548 aaPredicted RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 BRF2Q9HAW0 419 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 TMEM184CQ9NVA4 438 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 RNASET2O00584 256 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 PRAF2O60831 178 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 NR2C1P13056 603 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 PRDX3P30048 256 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 CHAF1BQ13112 559 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 UAP1L1Q3KQV9 507 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 NHSL2Q5HYW2 709 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 DUS1LQ6P1R4 473 aaKnown RBP12.25□□□□□ -0.45
COL3A1-201ENST00000304636 MSRAQ9UJ68 235 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 PCDHA9Q9Y5H5 950 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 INSL5Q9Y5Q6 135 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 C4AP0C0L4 1744 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
COL3A1-201ENST00000304636 GRXCR1A8MXD5 290 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 MEN1O00255 615 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ITGA5P08648 1049 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 BPIP17213 487 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 HRH2P25021 359 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 TNFSF8P32971 234 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 EIF2DP41214 584 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 RPS5P46782 204 aaKnown RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 SLC6A9P48067 706 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 CDKN1CP49918 316 aaPredicted RBP12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GPR19Q15760 415 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 BCL7AQ4VC05 210 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF805Q5CZA5 627 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 SPATC1Q76KD6 591 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 PMM1Q92871 262 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 FKBP10Q96AY3 582 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GMLQ99445 158 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 TDP1Q9NUW8 608 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 KCNN3Q9UGI6 736 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GLS2Q9UI32 602 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 E7EQ34 232 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 LEFTY2O00292 366 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 CASP3P42574 277 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 GPR4P46093 362 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 S100A12P80511 92 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 ZNF534Q76KX8 674 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 IQCF1Q8N6M8 205 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 BRI3BPQ8WY22 251 aa12.24□□□□□ -0.45
COL3A1-201ENST00000304636 F2RL3Q96RI0 385 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms