RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 TTLQ8NG68 377 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 VANGL1Q8TAA9 524 aaPredicted RBP6.8□□□□□ -1.32
RGPD3-201ENST00000304514 NT5CQ8TCD5 201 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 MOAP1Q96BY2 351 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 PRRC1Q96M27 445 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 ZNF582Q96NG8 517 aaPredicted RBP6.8□□□□□ -1.32
RGPD3-201ENST00000304514 ZNF607Q96SK3 696 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 C17orf62Q9BQA9 187 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 ANKMY1Q9P2S6 941 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 CCDC88CQ9P219 2028 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 HYKKA2RU49 373 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 M0R3H8 397 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 AQP9O43315 295 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 PROM1O43490 865 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 SLC35G4P0C7Q5 338 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 F3P13726 295 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 CPEP16870 476 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 PPP2R2DQ66LE6 453 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 CLIP4Q8N3C7 705 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 OR2L3Q8NG85 312 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 OR52I1Q8NGK6 324 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 SLC7A13Q8TCU3 470 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 C12orf66Q96MD2 445 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 Q96MT0 163 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 RAB11FIP5Q9BXF6 653 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 POLDIP3Q9BY77 421 aaKnown RBP6.8□□□□□ -1.32
RGPD3-201ENST00000304514 XKR8Q9H6D3 395 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 SLC35C2Q9NQQ7 365 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 TRAPPC4Q9Y296 219 aa6.8□□□□□ -1.32
RGPD3-201ENST00000304514 TPST2O60704 377 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 SOX14O95416 240 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 THY1P04216 161 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 MMP11P24347 488 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 AHRP35869 848 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 FEN1P39748 380 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 SOX3P41225 446 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 TSFMP43897 325 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 RAB28P51157 221 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 RUNX3Q13761 415 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 SPDYE7PQ495Y7 208 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ABHD17CQ6PCB6 329 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 TMC5Q6UXY8 1006 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ASB15Q8WXK1 588 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 CNRIP1Q96F85 164 aaPredicted RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 PLA2G12AQ9BZM1 189 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 RMI1Q9H9A7 625 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 MRPS30Q9NP92 439 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 NTMQ9P121 344 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 APOBEC3BQ9UH17 382 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 DIMT1Q9UNQ2 313 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 GPR55Q9Y2T6 319 aaPredicted RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 FAM32AQ9Y421 112 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 A0A075B6Q4 140 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 A0A0G2JPF8 293 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 HNRNPCL2B2RXH8 293 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 HNRNPCL3B7ZW38 293 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 CCRL2O00421 344 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 LATO43561 262 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 UGT2B17O75795 530 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 KAT7O95251 611 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 HNRNPCL4P0DMR1 293 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ATP5A1P25705 553 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 CERS1P27544 350 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 SOX18P35713 384 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 KIR2DL1P43626 348 aaPredicted RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 DGKEP52429 567 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 LSM11P83369 360 aaKnown RBP eCLIP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 CBX3Q13185 183 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 RPE65Q16518 533 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 SLC48A1Q6P1K1 146 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 FBXO46Q6PJ61 603 aaPredicted RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 FBXL6Q8N531 539 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 WDR36Q8NI36 951 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ZNF681Q96N22 645 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 MACROD1Q9BQ69 325 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 TSSK6Q9BXA6 273 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 FBXW2Q9UKT8 454 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 DOLKQ9UPQ8 538 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 DOCK9Q9BZ29 2069 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 SAGE2PA6NJ88 616 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 KDM4EB2RXH2 506 aaPredicted RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 STK25O00506 426 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 PGRMC2O15173 223 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 CASC3O15234 703 aaKnown RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 KLF4O43474 513 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 FAM26EQ8N5C1 309 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 IQCF1Q8N6M8 205 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ITFG2Q969R8 447 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 C10orf90Q96M02 699 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 OR7D2Q96RA2 312 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 C1QTNF2Q9BXJ5 285 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 STUB1Q9UNE7 303 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ATG4BQ9Y4P1 393 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 C10orf142B7Z368 130 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ASNA1O43681 348 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 NTN1O95631 604 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 RAB36O95755 333 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 STATHP02808 62 aa6.79□□□□□ -1.32
RGPD3-201ENST00000304514 HOXC4P09017 264 aaPredicted RBP6.79□□□□□ -1.32
RGPD3-201ENST00000304514 ACP5P13686 325 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms