RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CLCA2Q9UQC9 943 aa13.73□□□□□ -0.21
SMG8-201ENST00000300917 NTNG1Q9Y2I2 539 aa13.73□□□□□ -0.21
SMG8-201ENST00000300917 MUC3AQ02505 3323 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 OR2W5A6NFC9 320 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 SEC14L2O76054 403 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 NR2F6P10588 404 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 XKP51811 444 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 VSX2P58304 361 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 RUNX2Q13950 521 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 ADPRMQ3LIE5 342 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 FAM111BQ6SJ93 734 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 CCDC80Q76M96 950 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 VRK2Q86Y07 508 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 IQCF1Q8N6M8 205 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 RPL3LQ92901 407 aaKnown RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 SLC6A18Q96N87 628 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 ZNF607Q96SK3 696 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 C8orf33Q9H7E9 229 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 IL21RQ9HBE5 538 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 ACSS1Q9NUB1 689 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 GIMAP4Q9NUV9 329 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 ADAM29Q9UKF5 820 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 HCN4Q9Y3Q4 1203 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 RGS10O43665 173 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 KDM1AO60341 852 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 FCMRO60667 390 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 APBB3O95704 486 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 RHCEP18577 417 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 SLC35A2P78381 396 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 CHRNEQ04844 493 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 FUT5Q11128 374 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 AQP6Q13520 282 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 PTGES3Q15185 160 aaKnown RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 OR6T1Q8NGN1 323 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 POP5Q969H6 163 aaKnown RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 A4GALTQ9NPC4 353 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 ADAP2Q9NPF8 381 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 DNAAF2Q9NVR5 837 aaKnown RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 ZNF99A8MXY4 864 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 H0YGG7 62 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 CDC123O75794 336 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 TNFP01375 233 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 HSMCR30P0CW71 290 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 PCMT1P22061 227 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 MPIP34949 423 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 AVPR1BP47901 424 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 ARF3P61204 181 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 VBP1P61758 197 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 KCNC4Q03721 635 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 NFATC3Q12968 1075 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 TARDBPQ13148 414 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMG8-201ENST00000300917 TOP3AQ13472 1001 aaPredicted RBP13.72□□□□□ -0.21
SMG8-201ENST00000300917 UBXN2BQ14CS0 331 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 GTF2IRD2BQ6EKJ0 949 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 GTF2IRD2Q86UP8 949 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 SLC16A11Q8NCK7 471 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 TBC1D20Q96BZ9 403 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 COPS4Q9BT78 406 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 FBRSQ9HAH7 460 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 THSD1Q9NS62 852 aa13.72□□□□□ -0.21
SMG8-201ENST00000300917 TPD52L2O43399 206 aaKnown RBP13.71□□□□□ -0.21
SMG8-201ENST00000300917 DNAJB5O75953 348 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 STSP08842 583 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 ANXA8P13928 327 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 HOXB6P17509 224 aaKnown RBP13.71□□□□□ -0.21
SMG8-201ENST00000300917 FRKP42685 505 aaPredicted RBP13.71□□□□□ -0.21
SMG8-201ENST00000300917 MLLT1Q03111 559 aaPredicted RBP13.71□□□□□ -0.21
SMG8-201ENST00000300917 IL18R1Q13478 541 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 MRM1Q6IN84 353 aaKnown RBP13.71□□□□□ -0.21
SMG8-201ENST00000300917 TRIM69Q86WT6 500 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 OR2A5Q96R48 311 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 PITHD1Q9GZP4 211 aaPredicted RBP13.71□□□□□ -0.21
SMG8-201ENST00000300917 KLHL3Q9UH77 587 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 FANCMQ8IYD8 2048 aa13.71□□□□□ -0.21
SMG8-201ENST00000300917 CFAP54Q96N23 3096 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 A6NCN8 305 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 KCNJ13O60928 360 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 SERPINB7O75635 380 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 CNR2P34972 360 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 KCNJ5P48544 419 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 CRISP3P54108 245 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 MAZP56270 477 aaKnown RBP13.71□□□□□ -0.22
SMG8-201ENST00000300917 ANKDD1AQ495B1 522 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 DCST1Q5T197 706 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 C16orf62Q7Z3J2 963 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 OR7G2Q8NG99 324 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 SLC7A13Q8TCU3 470 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 ABHD8Q96I13 439 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 OR7D2Q96RA2 312 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 GPR55Q9Y2T6 319 aaPredicted RBP13.71□□□□□ -0.22
SMG8-201ENST00000300917 GMEB1Q9Y692 573 aa13.71□□□□□ -0.22
SMG8-201ENST00000300917 NPIPA5A0A0B4J1W7 369 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 NPIPA7E9PJI5 369 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 STK25O00506 426 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 SDC3O75056 442 aa13.7□□□□□ -0.22
SMG8-201ENST00000300917 NPIPA8P0DM63 369 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms