RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OXA1LQ15070 435 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 NDUFAF5Q5TEU4 345 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ZNF367Q7RTV3 350 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 MAN2B2Q9Y2E5 1009 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ISPDA4D126 451 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 CACNB4O00305 520 aaPredicted RBP12.64□□□□□ -0.39
CASC4-201ENST00000299957 CPNE6O95741 557 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ASGR2P07307 311 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 GKN3PP0CG01 181 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 SPNP16150 400 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 UQCRC2P22695 453 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 CTGFP29279 349 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ACSL1P33121 698 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 AHRP35869 848 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 CAPZA2P47755 286 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ZNF267Q14586 743 aaPredicted RBP12.64□□□□□ -0.39
CASC4-201ENST00000299957 LRRC26Q2I0M4 334 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 ZNF385BQ569K4 471 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 KLHL36Q8N4N3 616 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.64□□□□□ -0.39
CASC4-201ENST00000299957 ANKMY1Q9P2S6 941 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 STON1Q9Y6Q2 735 aa12.64□□□□□ -0.39
CASC4-201ENST00000299957 MEIOCA2RUB1 952 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 LRRTM2O43300 516 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 GPR37L1O60883 481 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 FKTNO75072 461 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 HMGN2P05204 90 aaKnown RBP12.63□□□□□ -0.39
CASC4-201ENST00000299957 MAP2K3P46734 347 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 MTNR1AP48039 350 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 MGAT3Q09327 533 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 KDM4DQ6B0I6 523 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 PNCKQ6P2M8 343 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 OTUB2Q96DC9 234 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 MED20Q9H944 212 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 NFKBIL1Q9UBC1 381 aaPredicted RBP12.63□□□□□ -0.39
CASC4-201ENST00000299957 NEU3Q9UQ49 428 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 TEX46H3BTG2 121 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 PROM1O43490 865 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 AKAP8O43823 692 aaKnown RBP12.63□□□□□ -0.39
CASC4-201ENST00000299957 NUAK1O60285 661 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 KHKP50053 298 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 BCL2L15Q5TBC7 163 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 GRHL2Q6ISB3 625 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 CNIH2Q6PI25 160 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 LIPIQ6XZB0 460 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 SLC38A5Q8WUX1 472 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 C16orf58Q96GQ5 468 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 PDLIM5Q96HC4 596 aaKnown RBP12.63□□□□□ -0.39
CASC4-201ENST00000299957 SRMSQ9H3Y6 488 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 CXorf36Q9H7Y0 433 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 PSORS1C1Q9UIG5 152 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 HCN2Q9UL51 889 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 MGAT4BQ9UQ53 548 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 SLC27A6Q9Y2P4 619 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 SPEF1Q9Y4P9 236 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 SLC16A6O15403 523 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 HPGDSO60760 199 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 OR2B3O76000 313 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 KLHL18O94889 574 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 RAB36O95755 333 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 AHCYP23526 432 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 RPS19P39019 145 aaKnown RBP12.63□□□□□ -0.39
CASC4-201ENST00000299957 ZNF81P51508 661 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 CPOQ8IVL8 374 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 SERPINA12Q8IW75 414 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 DENND6BQ8NEG7 585 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 OR2A12Q8NGT7 310 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 TESCQ96BS2 214 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 GINS4Q9BRT9 223 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 DMRT3Q9NQL9 472 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 TAS2R7Q9NYW3 318 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 MKL2Q9ULH7 1088 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 TAF1LQ8IZX4 1826 aa12.63□□□□□ -0.39
CASC4-201ENST00000299957 ZSCAN5BA6NJL1 495 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 GTPBP1O00178 669 aaKnown RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 MEN1O00255 615 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 UPK1AO00322 258 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 HLA-DPB1P04440 258 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 HTR1AP08908 422 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 ATF4P18848 351 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 FADDQ13158 208 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SP140Q13342 867 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 VEZF1Q14119 521 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TMEM31Q5JXX7 168 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SFRP4Q6FHJ7 346 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 PODNL1Q6PEZ8 512 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 RTL4Q6ZR62 310 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 DCUN1D3Q8IWE4 304 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 RASSF5Q8WWW0 418 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TMEM175Q9BSA9 504 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TMEM27Q9HBJ8 222 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 CPNE5Q9HCH3 593 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 TEX10Q9NXF1 929 aaPredicted RBP12.62□□□□□ -0.39
CASC4-201ENST00000299957 SLC6A14Q9UN76 642 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 C12orf71A8MTZ7 269 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 SLC35G6P0C7Q6 338 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 ITGAMP11215 1152 aa12.62□□□□□ -0.39
CASC4-201ENST00000299957 OSMP13725 252 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms