RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PDCD5O14737 125 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 LYRM1O43325 122 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF26P17031 533 aaPredicted RBP10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 ARCN1P48444 511 aaKnown RBP10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SMSP52788 366 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 KANK2Q63ZY3 851 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 NRARPQ7Z6K4 114 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PARP16Q8N5Y8 322 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 GPR151Q8TDV0 419 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 NAT6Q93015 286 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PFDN5Q99471 154 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 AIG1Q9NVV5 245 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 COPS7AQ9UBW8 275 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PCDHGB5Q9Y5G0 923 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 DCTP40126 519 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 GDF5P43026 501 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CDK6Q00534 326 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 NIPAL4Q0D2K0 466 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SNTB2Q13425 540 aaKnown RBP10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 CCDC58Q4VC31 144 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PRAMEF14Q5SWL7 426 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PRAMEF13Q5VWM6 474 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 OR4C6Q8NH72 309 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 OR5AK3PQ8NH89 298 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 SETD6Q8TBK2 473 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 KIAA1191Q96A73 305 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 FZD3Q9NPG1 666 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 PCDHGA11Q9Y5H2 935 aa10.85□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF705EA8MWA4 302 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 GPR89AB7ZAQ6 455 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 PCDH17O14917 1159 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC19A2O60779 497 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 CD2P06729 351 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 FHP07954 510 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 GPR89BP0CG08 455 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 HTR2AP28223 471 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 OR3A3P47888 321 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 C1orf61Q13536 156 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 LRP8Q14114 963 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 PTGES3Q15185 160 aaKnown RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC14A2Q15849 920 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 UNC50Q53HI1 259 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ELP2Q6IA86 826 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 CEP97Q8IW35 865 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 OR4E2Q8NGC2 313 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 RPL3LQ92901 407 aaKnown RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 SLC35A5Q9BS91 424 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 FARSBQ9NSD9 589 aaKnown RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 C19orf25Q9UFG5 118 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 NOP16Q9Y3C1 178 aaKnown RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 A0A1W2PQ09 198 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 A0A1W2PRQ8 180 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 SNAPC5O75971 98 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 HRH2P25021 359 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 AGTR2P50052 363 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 Q6ZSR6 202 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 TMEM102Q8N9M5 508 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 C2CD4AQ8NCU7 369 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ZDHHC1Q8WTX9 485 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 RNF31Q96EP0 1072 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 APOOQ9BUR5 198 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 EFCAB11Q9BUY7 163 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 RBCK1Q9BYM8 510 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 MTG2Q9H4K7 406 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 LTB4R2Q9NPC1 389 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 OSER1Q9NX31 292 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 PCDHGA2Q9Y5H1 932 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 LOXHD1Q8IVV2 1947 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 A0A1W2PRB8 838 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 HHLA1C9JL84 531 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 F5H0A9 414 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 PAHP00439 452 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 HMGN1P05114 100 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 PROS1P07225 676 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 DCNP07585 359 aaKnown RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 CHMP24386 653 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 KDELR2P33947 212 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ARHGDIBP52566 201 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 LRRC37A5PQ49AS3 106 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ATG9BQ674R7 924 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 PAMR1Q6UXH9 720 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF248Q8NDW4 579 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 CHDHQ8NE62 594 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ZNF548Q8NEK5 533 aaPredicted RBP10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 OR13F1Q8NGS4 319 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ADAMTS16Q8TE57 1224 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 SCAMP4Q969E2 229 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 NKD1Q969G9 470 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 NXPE2Q96DL1 559 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 NTN4Q9HB63 628 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 DNAJC15Q9Y5T4 150 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 LOC730098B7Z3J9 87 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 MUSKO15146 869 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 ARL6IP5O75915 188 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 RAB36O95755 333 aa10.84□□□□□ -0.67
NPC1L1-201ENST00000289547 VAMP1P23763 118 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms