RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 RDH14Q9HBH5 336 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 PTRH2Q9Y3E5 179 aaKnown RBP17.63■□□□□ 0.41
PCDH1-201ENST00000287008 CDH10Q9Y6N8 788 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 AP1M2Q9Y6Q5 423 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 CD63P08962 238 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 SHHQ15465 462 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 ANKRD54Q6NXT1 300 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 ASB18Q6ZVZ8 466 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 ANKRD33Q7Z3H0 272 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF227Q86WZ6 799 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 SLC5A8Q8N695 610 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 FAM174AQ8TBP5 190 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 NEIL2Q969S2 332 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 PTTG2Q9NZH5 202 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 FBXO9Q9UK97 447 aaPredicted RBP17.63■□□□□ 0.41
PCDH1-201ENST00000287008 H0YJX3 145 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 BRINP1O60477 761 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 CERS1P27544 350 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 HOXA9P31269 272 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 DLX2Q07687 328 aaPredicted RBP17.63■□□□□ 0.41
PCDH1-201ENST00000287008 TYSND1Q2T9J0 566 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 LETMD1Q6P1Q0 360 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 PSD4Q8NDX1 1056 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF548Q8NEK5 533 aaPredicted RBP17.63■□□□□ 0.41
PCDH1-201ENST00000287008 OR8J1Q8NGP2 316 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 PTERQ96BW5 349 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 NXPE2Q96DL1 559 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 IGSF5Q9NSI5 407 aa17.63■□□□□ 0.41
PCDH1-201ENST00000287008 A0A0G2JPF8 293 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 HNRNPCL3B7ZW38 293 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 SOCS2O14508 198 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 HNRNPCL4P0DMR1 293 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 PRKCAP17252 672 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 GLP1RP43220 463 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 SOX2P48431 317 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 COQ5Q5HYK3 327 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 ERI1Q8IV48 349 aaKnown RBP17.62■□□□□ 0.41
PCDH1-201ENST00000287008 SLITRK4Q8IW52 837 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 OR2A12Q8NGT7 310 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 CCDC107Q8WV48 283 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 APC2O95996 2303 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 PRAMEF33A0A0G2JMD5 474 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 KIAA0355O15063 1070 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 PRAMEF10O60809 474 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 HOXD8P13378 290 aaPredicted RBP17.62■□□□□ 0.41
PCDH1-201ENST00000287008 CELP19835 753 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 MLLT10P55197 1068 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 OCLNQ16625 522 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 CARD17Q5XLA6 110 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 PGBD2Q6P3X8 592 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 LRRC69Q6ZNQ3 347 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 MAMDC2Q7Z304 686 aaPredicted RBP17.62■□□□□ 0.41
PCDH1-201ENST00000287008 TEX26Q8N6G2 289 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 MYRFLQ96LU7 910 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 TTTY10Q9BZA0 68 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 MGAT4AQ9UM21 535 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 SOBPA7XYQ1 873 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 XCR1P46094 333 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 MFSD13AQ14CX5 517 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 VWA5B2Q8N398 1253 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 AREL1O15033 823 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 MRPL3P09001 348 aaKnown RBP17.62■□□□□ 0.41
PCDH1-201ENST00000287008 NDUFV2P19404 249 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 GGT2P36268 569 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 EXOC3L2Q2M3D2 409 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 ZBED5Q49AG3 693 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 CCDC36Q8IYA8 594 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 KDM1BQ8NB78 822 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 SYT11Q9BT88 431 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 SEC14L4Q9UDX3 406 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF451Q9Y4E5 1061 aa17.62■□□□□ 0.41
PCDH1-201ENST00000287008 PENKP01210 267 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 CCR7P32248 378 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 MLF2Q15773 248 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 HPS1Q92902 700 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 LHX3Q9UBR4 397 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 FMO6PO60774 539 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 ACTC1P68032 377 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 ACTA1P68133 377 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 ATP6AP1Q15904 470 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 TMEM240Q5SV17 173 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 TMEM173Q86WV6 379 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 PPP1R3BQ86XI6 285 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 FTMTQ8N4E7 242 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 TMEM174Q8WUU8 243 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 THAP4Q8WY91 577 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 TANKQ92844 425 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 MSANTD3Q96H12 275 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 MS4A4EQ96PG1 132 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF559Q9BR84 538 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 CCDC106Q9BWC9 280 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 CCM2LQ9NUG4 571 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 PLEKHA6Q9Y2H5 1048 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 LAMB4A4D0S4 1761 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 A6NLC8 198 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 FLRT2O43155 660 aa17.61■□□□□ 0.41
PCDH1-201ENST00000287008 ZNF888P0CJ79 500 aaPredicted RBP17.61■□□□□ 0.41
PCDH1-201ENST00000287008 CSNK1EP49674 416 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms