RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.3□□□□□ -0.28
HMGN3-201ENST00000275036 OXSMQ9NWU1 459 aa13.3□□□□□ -0.28
HMGN3-201ENST00000275036 DTX4Q9Y2E6 619 aa13.3□□□□□ -0.28
HMGN3-201ENST00000275036 KLF2Q9Y5W3 355 aaPredicted RBP13.3□□□□□ -0.28
HMGN3-201ENST00000275036 LIPGQ9Y5X9 500 aa13.3□□□□□ -0.28
HMGN3-201ENST00000275036 MYO9AB2RTY4 2548 aa13.3□□□□□ -0.28
HMGN3-201ENST00000275036 MED12Q93074 2177 aa13.3□□□□□ -0.28
HMGN3-201ENST00000275036 APCP25054 2843 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 C2orf92A0A1B0GVN3 265 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 SERTM1A2A2V5 107 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 PCDH7O60245 1069 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-201ENST00000275036 GUCY1B2O75343 617 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 PDE9AO76083 593 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 IL3P08700 152 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 FBXO45P0C2W1 286 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-201ENST00000275036 CPA3P15088 417 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 HTR1EP28566 365 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 SERPINB3P29508 390 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 PIGAP37287 484 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 ALDH9A1P49189 494 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 CASP6P55212 293 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 PPIAP62937 165 aaKnown RBP13.29□□□□□ -0.28
HMGN3-201ENST00000275036 BTKQ06187 659 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 PCLAFQ15004 111 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 LTB4RQ15722 352 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 MTFR2Q6P444 385 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 FAM47EQ6ZV65 393 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 C10orf107Q8IVU9 208 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 SLC34A3Q8N130 599 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 RPRMLQ8N4K4 120 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 ADCY4Q8NFM4 1077 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 OR10G3Q8NGC4 313 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 RDH11Q8TC12 318 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 PAQR8Q8TEZ7 354 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 ADIPOR1Q96A54 375 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 KLHL29Q96CT2 875 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 CNRIP1Q96F85 164 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-201ENST00000275036 FAM173AQ9BQD7 235 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 EBPLQ9BY08 206 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 SHCBP1LQ9BZQ2 653 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 OR10A5Q9H207 317 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 ZDHHC11Q9H8X9 412 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 TUBA8Q9NY65 449 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-201ENST00000275036 MAT2BQ9NZL9 334 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 DLGAP4Q9Y2H0 992 aa13.29□□□□□ -0.28
HMGN3-201ENST00000275036 CHCHD2Q9Y6H1 151 aaPredicted RBP13.29□□□□□ -0.28
HMGN3-201ENST00000275036 HNRNPRO43390 633 aaKnown RBP13.28□□□□□ -0.28
HMGN3-201ENST00000275036 LRATO95237 230 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 P04436 131 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 ATP1B1P05026 303 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 CELA3AP09093 270 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 TIA1P31483 386 aaKnown RBP eCLIP13.28□□□□□ -0.28
HMGN3-201ENST00000275036 PTGS2P35354 604 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 DEKP35659 375 aaKnown RBP13.28□□□□□ -0.28
HMGN3-201ENST00000275036 PLGLB1Q02325 96 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 ACSM2AQ08AH3 577 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 EXOSC7Q15024 291 aaKnown RBP13.28□□□□□ -0.28
HMGN3-201ENST00000275036 ZNF630Q2M218 657 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-201ENST00000275036 SPIN4Q56A73 249 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 EMC4Q5J8M3 183 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 PRAMEF20Q5VT98 475 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 ACSM2BQ68CK6 577 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 WDR93Q6P2C0 686 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 GALNT18Q6P9A2 607 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 GK5Q6ZS86 529 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 TRABD2AQ86V40 505 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 CD163Q86VB7 1156 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 VWA5B2Q8N398 1253 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 BANPQ8N9N5 519 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 CCDC63Q8NA47 563 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 FAM13CQ8NE31 585 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 C16orf78Q8WTQ4 265 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 CTHRC1Q96CG8 243 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 BRINP2Q9C0B6 783 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 SIRT5Q9NXA8 310 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 ZNF639Q9UID6 485 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 UTS2RQ9UKP6 389 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 PLLPQ9Y342 182 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 ARHGAP21Q5T5U3 1957 aa13.28□□□□□ -0.28
HMGN3-201ENST00000275036 GNG14A0A1W2PPG7 69 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 SLU7O95391 586 aaKnown RBP13.27□□□□□ -0.29
HMGN3-201ENST00000275036 CBX7O95931 251 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 TPOP07202 933 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 CSNK2A2P19784 350 aaPredicted RBP13.27□□□□□ -0.29
HMGN3-201ENST00000275036 GPX3P22352 226 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 MAGEA5P43359 124 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 FBXW4P57775 412 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 NAA20P61599 178 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 MRPS35P82673 323 aaKnown RBP13.27□□□□□ -0.29
HMGN3-201ENST00000275036 MAP4K2Q12851 820 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 NTRK2Q16620 822 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 PRSS53Q2L4Q9 553 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 TRMT12Q53H54 448 aaKnown RBP13.27□□□□□ -0.29
HMGN3-201ENST00000275036 CFAP157Q5JU67 520 aa13.27□□□□□ -0.29
HMGN3-201ENST00000275036 LIPMQ5VYY2 423 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms