RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ZNF607Q96SK3 696 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 DUSP23Q9BVJ7 150 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 SOX17Q9H6I2 414 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 REEP1Q9H902 201 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 BATF3Q9NR55 127 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 USE1Q9NZ43 259 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 NDUFAF4Q9P032 175 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 IFT80Q9P2H3 777 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 SH3GLB1Q9Y371 365 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 SAMHD1Q9Y3Z3 626 aaKnown RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ZNF451Q9Y4E5 1061 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 PI4KAP42356 2102 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 MN1Q10571 1320 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 PRAMEF25A6NGN4 478 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 CASC3O15234 703 aaKnown RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 HS6ST1O60243 411 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 NME6O75414 186 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 MFN2O95140 757 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 NSA2O95478 260 aaKnown RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ALBP02768 609 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ATP1B1P05026 303 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 GNAO1P09471 354 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 FPR1P21462 350 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 CD1CP29017 333 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 DNAJA1P31689 397 aaKnown RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 CAPGP40121 348 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ARL4DP49703 201 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ARHGDIAP52565 204 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 CRISP3P54108 245 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 HSD11B2P80365 405 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 FUT5Q11128 374 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 FAM53BQ14153 422 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 LAPTM4AQ15012 233 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ZIK1Q3SY52 487 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ZNF628Q5EBL2 1059 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 GARNL3Q5VVW2 1013 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 PEAR1Q5VY43 1037 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 KRT80Q6KB66 452 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 NIPAL1Q6NVV3 410 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 CARFQ8N187 725 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 OR2L13Q8N349 312 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 METTL27Q8N6F8 245 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 SAP25Q8TEE9 199 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 FBXL20Q96IG2 436 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 COL21A1Q96P44 957 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 BARD1Q99728 777 aaKnown RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 ACTRT3Q9BYD9 372 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 SPRTNQ9H040 489 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-201ENST00000266589 THSD1Q9NS62 852 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 NTMQ9P121 344 aa10.85□□□□□ -0.67
SCAF11-201ENST00000266589 CCDC88CQ9P219 2028 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 ASNA1O43681 348 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 DPM1O60762 260 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 CHRM4P08173 479 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 RNH1P13489 461 aaKnown RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 CD247P20963 164 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 NT5EP21589 574 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 RRM2P31350 389 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 MAT1AQ00266 395 aaKnown RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 MYBPC1Q00872 1141 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 GNA13Q14344 377 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 GRM7Q14831 915 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 INAVAQ3KP66 663 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 GPAT3Q53EU6 434 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 OLIG3Q7RTU3 272 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 WDR53Q7Z5U6 358 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 DTWD2Q8NBA8 298 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 SIMC1Q8NDZ2 872 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 OR4C6Q8NH72 309 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 BBS10Q8TAM1 723 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 DOK4Q8TEW6 326 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 ANKRD9Q96BM1 317 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 MMABQ96EY8 250 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 PEX11GQ96HA9 241 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 ZC3H10Q96K80 434 aaKnown RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 RDH12Q96NR8 316 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 ZNF300Q96RE9 604 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 GABARAPL1Q9H0R8 117 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 GAREM1Q9H706 876 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 PTGFRNQ9P2B2 879 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 SEC14L3Q9UDX4 400 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 TESMINQ9Y4I5 508 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 GPC6Q9Y625 555 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-201ENST00000266589 KCNE3Q9Y6H6 103 aa10.84□□□□□ -0.67
SCAF11-201ENST00000266589 ADAMTS20P59510 1910 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 FITM1A5D6W6 292 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 A8MU76 341 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 TMEM150CB9EJG8 249 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 ADAMDEC1O15204 470 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 SERPINB7O75635 380 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 CDC123O75794 336 aaPredicted RBP10.83□□□□□ -0.68
SCAF11-201ENST00000266589 OR2B3O76000 313 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 CLIC3O95833 236 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 RECKO95980 971 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 FESP07332 822 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 ITGA2P17301 1181 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 NELFEP18615 380 aaKnown RBP10.83□□□□□ -0.68
SCAF11-201ENST00000266589 MYF6P23409 242 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 SOX18P35713 384 aa10.83□□□□□ -0.68
SCAF11-201ENST00000266589 YAP1P46937 504 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms