RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TAOK1Q7L7X3 1001 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 CCDC71Q8IV32 467 aaPredicted RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 DND1Q8IYX4 353 aaKnown RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 LRRC25Q8N386 305 aaPredicted RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 METTL4Q8N3J2 472 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 OR4F6Q8NGB9 312 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 OR10G3Q8NGC4 313 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 OR4K14Q8NGD5 310 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 OR5M9Q8NGP3 310 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 UHMK1Q8TAS1 419 aaKnown RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 TRPC4APQ8TEL6 797 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 TP53INP1Q96A56 240 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 C14orf79Q96F83 325 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 HSH2DQ96JZ2 352 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 GAL3ST4Q96RP7 486 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 TTYH2Q9BSA4 534 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 C1QTNF3Q9BXJ4 246 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 MRPL1Q9BYD6 325 aaKnown RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 UCK2Q9BZX2 261 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 MRPL46Q9H2W6 279 aaKnown RBP8.95□□□□□ -0.98
VPS41-201ENST00000265745 ZFP64Q9NPA5 681 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 AHSPQ9NZD4 102 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 CNIH4Q9P003 139 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 TNFRSF10DQ9UBN6 386 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 ACAD8Q9UKU7 415 aa8.95□□□□□ -0.98
VPS41-201ENST00000265745 A0A087WUV0 522 aaPredicted RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 C2orf92A0A1B0GVN3 265 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 LRRC3CA6NJW4 275 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 HCN1O60741 890 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 OTCP00480 354 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 SNRPAP09012 282 aaKnown RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 CT62P0C5K7 136 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CTAGE8P0CG41 777 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 GLI4P10075 376 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 S1PR1P21453 382 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 PIK3R1P27986 724 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 SSTR4P31391 388 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 MAN2A2P49641 1150 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 IDH3AP50213 366 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 XKP51811 444 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CDH13P55290 713 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 NUP107P57740 925 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 KRTAP10-9P60411 292 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 KCNJ2P63252 427 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 IFT88Q13099 833 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CCNYL2Q5T2Q4 361 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 RTL6Q6ICC9 239 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 LETMD1Q6P1Q0 360 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 TMEM64Q6YI46 380 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 MEX3BQ6ZN04 569 aaKnown RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 TIFABQ6ZNK6 161 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 RPS27LQ71UM5 84 aaKnown RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 PAGE2Q7Z2X7 111 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CTAGE4Q8IX94 777 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 GALNT12Q8IXK2 581 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 TAGAPQ8N103 731 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 FBXW8Q8N3Y1 598 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 ZNF615Q8N8J6 731 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 FAM13CQ8NE31 585 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 MYRIPQ8NFW9 859 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 OR5M3Q8NGP4 307 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 ZNF483Q8TF39 744 aaPredicted RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 SARAFQ96BY9 339 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 ELOVL6Q9H5J4 265 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 ZNF703Q9H7S9 590 aaPredicted RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 ACKR4Q9NPB9 350 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 KCNJ16Q9NPI9 418 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 FARSBQ9NSD9 589 aaKnown RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 ZNF225Q9UK10 706 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CES1P1Q9UKY3 287 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CNOT11Q9UKZ1 510 aaKnown RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 BOKQ9UMX3 212 aaPredicted RBP8.94□□□□□ -0.98
VPS41-201ENST00000265745 FAM215AQ9Y5M1 114 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 CCDC168Q8NDH2 2452 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 POLQO75417 2590 aa8.94□□□□□ -0.98
VPS41-201ENST00000265745 TRGV5A0A0B4J1U4 118 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 NKX2-6A6NCS4 301 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 A8MT66 165 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 WDR1O75083 606 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 TRIM3O75382 744 aaPredicted RBP8.93□□□□□ -0.98
VPS41-201ENST00000265745 PDYNP01213 254 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 HOXD4P09016 255 aaPredicted RBP8.93□□□□□ -0.98
VPS41-201ENST00000265745 CPMP14384 443 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 PORP16435 677 aaPredicted RBP8.93□□□□□ -0.98
VPS41-201ENST00000265745 TSPAN8P19075 237 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 CAPN3P20807 821 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 ENDOUP21128 410 aaKnown RBP8.93□□□□□ -0.98
VPS41-201ENST00000265745 HSD17B3P37058 310 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 MAPK12P53778 367 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 FBXW4P57775 412 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 MGAT2Q10469 447 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 GALNT1Q10472 559 aaPredicted RBP8.93□□□□□ -0.98
VPS41-201ENST00000265745 WLSQ5T9L3 541 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 LGSNQ5TDP6 509 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 SLC48A1Q6P1K1 146 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 B3GNT6Q6ZMB0 384 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 COMMD6Q7Z4G1 85 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 C17orf47Q8NEP4 570 aa8.93□□□□□ -0.98
VPS41-201ENST00000265745 OR7G1Q8NGA0 311 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms