RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 DUSP16Q9BY84 665 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 RC3H2Q9HBD1 1191 aaKnown RBP8.33□□□□□ -1.08
VAPB-201ENST00000265619 SLC25A19Q9HC21 320 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 XIRP2A4UGR9 3374 aa8.33□□□□□ -1.08
VAPB-201ENST00000265619 ANKRD36A6QL64 1941 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 GSAPA4D1B5 854 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SGK494L7N484 410 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SLC28A1O00337 649 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 EIF1BO60739 113 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 PAGE1O75459 146 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ANXA9O76027 345 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 TBX18O95935 607 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 GLUD1P00367 558 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 BCKDHAP12694 445 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SELPP16109 830 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ENGP17813 658 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ITPKAP23677 461 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 MST1P26927 711 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 EIF1P41567 113 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 CTSOP43234 321 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 PPM1FP49593 454 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 ARFIP1P53367 373 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SP140Q13342 867 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 CRB2Q5IJ48 1285 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SIRPB2Q5JXA9 342 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 RAET1GQ6H3X3 334 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 FAM198BQ6UWH4 519 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.32□□□□□ -1.08
VAPB-201ENST00000265619 Q6ZTK2 550 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 PAQR9Q6ZVX9 377 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 USP45Q70EL2 814 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 PDZD4Q76G19 769 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 ATPAF2Q8N5M1 289 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 LINC01599Q8WXQ3 324 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 FBXO17Q96EF6 278 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ELMOD3Q96FG2 381 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 EPYCQ99645 322 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 CRB3Q9BUF7 120 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ZNF436Q9C0F3 470 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 ELAC1Q9H777 363 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 PRDM9Q9NQV7 894 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ING1Q9UK53 422 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 HCN2Q9UL51 889 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 FLVCR2Q9UPI3 526 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 CLCA2Q9UQC9 943 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 DERAQ9Y315 318 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SPIN1Q9Y657 262 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 C2orf92A0A1B0GVN3 265 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 WNT9AO14904 365 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 EEF1E1O43324 174 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 MMP2P08253 660 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 OR56A5P0C7T3 313 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 DRD5P21918 477 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ITGB8P26012 769 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 GIFP27352 417 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ACADLP28330 430 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 PXNP49023 591 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 GEMP55040 296 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 BTG1P62324 171 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ABHD18Q0P651 414 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 CRTC2Q53ET0 693 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 LRIF1Q5T3J3 769 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SLC27A4Q6P1M0 643 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 C5orf46Q6UWT4 87 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 WASH2PQ6VEQ5 465 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 STK40Q8N2I9 435 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 NANOGP1Q8N7R0 232 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ZNF454Q8N9F8 522 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 OR4C15Q8NGM1 316 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 C9orf43Q8TAL5 461 aaPredicted RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 SLC25A28Q96A46 364 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ELP4Q96EB1 424 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 C12orf66Q96MD2 445 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ZNF382Q96SR6 550 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 RNF32Q9H0A6 362 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 MPP6Q9NZW5 540 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 MRTO4Q9UKD2 239 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 ZFR2Q9UPR6 939 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 ADRB1P08588 477 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SULT1A3P0DMM9 295 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SULT1A4P0DMN0 295 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SPP1P10451 314 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 RAB3BP20337 219 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SPIBQ01892 262 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 DUSP4Q13115 394 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SF1Q15637 639 aaKnown RBP8.32□□□□□ -1.08
VAPB-201ENST00000265619 NTRK2Q16620 822 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ARHGAP15Q53QZ3 475 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 TCTE1Q5JU00 501 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 ARTNQ5T4W7 220 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SHFQ7M4L6 423 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 LUZP2Q86TE4 346 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 RGL4Q8IZJ4 473 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 CLECL1Q8IZS7 167 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 DNAJB8Q8NHS0 232 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 TMEM163Q8TC26 289 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SPPL2AQ8TCT8 520 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 PIH1D2Q8WWB5 315 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 SLC2A13Q96QE2 648 aa8.32□□□□□ -1.08
VAPB-201ENST00000265619 COLEC11Q9BWP8 271 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms