RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 IZUMO2Q6UXV1 221 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 LRRC74BQ6ZQY2 392 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SMYD1Q8NB12 490 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 OR52R1Q8NGF1 315 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 OR8J2Q8NGG1 315 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 PIGXQ8TBF5 258 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 WDR60Q8WVS4 1066 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SMPDL3BQ92485 455 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 MRPL48Q96GC5 212 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 MAELQ96JY0 434 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 ZC3H10Q96K80 434 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 S100A14Q9HCY8 104 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 CTPS2Q9NRF8 586 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 HPF1Q9NWY4 346 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 WARS2Q9UGM6 360 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 TESMINQ9Y4I5 508 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 D6RAR5 112 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 MEN1O00255 615 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 B4GAT1O43505 415 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 TRAPPC6AO75865 159 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 KRT33AO76009 404 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 GADD45GO95257 159 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 MT-ND1P03886 318 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 FUCA1P04066 466 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 HMGN2P05204 90 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 CKMT1AP12532 417 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 HTR1EP28566 365 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 HNRNPH1P31943 449 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 ILKQ13418 452 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 GTDC1Q4AE62 458 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 CYBRD1Q53TN4 286 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SFT2D3Q587I9 215 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 PAGE3Q5JUK9 113 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 HES3Q5TGS1 186 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 TTC23Q5W5X9 447 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 C6orf89Q6UWU4 347 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 RTL4Q6ZR62 310 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 GALNT6Q8NCL4 622 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 OR5T3Q8NGG3 340 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 TEX47Q8TBZ9 253 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 STT3BQ8TCJ2 826 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SLC38A2Q96QD8 506 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 OR1F2PQ96R84 312 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 EPS8L2Q9H6S3 715 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 ALKBH4Q9NXW9 302 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 B4GALT7Q9UBV7 327 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 POLR1DQ9Y2S0 133 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 MCIDASD6RGH6 385 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 G3V2T6 193 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SCO2O43819 266 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 PRAMEF10O60809 474 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 KDELR2P33947 212 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 GSSP48637 474 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SNTA1Q13424 505 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 CSRP2Q16527 193 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 METTL25Q8N6Q8 603 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 OR52E4Q8NGH9 312 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 OR52J3Q8NH60 311 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 TMEM234Q8WY98 164 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SH3YL1Q96HL8 342 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 ZNF578Q96N58 590 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 GPATCH1Q9BRR8 931 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SPNS1Q9H2V7 528 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 DENND2DQ9H6A0 471 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 MTHFD2LQ9H903 347 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 SPIN1Q9Y657 262 aaPredicted RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 URB1O60287 2271 aaKnown RBP7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 GREB1Q4ZG55 1949 aa7.79□□□□□ -1.16
GTF3C3-201ENST00000263956 TRBV11-1A0A0K0K1C0 115 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 HCRTR2O43614 444 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 TPP2P29144 1249 aaPredicted RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 ZNF41P51814 821 aaPredicted RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 CDC42P60953 191 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 EXOSC7Q15024 291 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 OR52P1PQ8NH57 321 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 SNIP1Q8TAD8 396 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 TM9SF4Q92544 642 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 NR4A3Q92570 626 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 DIO2Q92813 273 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 WDR34Q96EX3 536 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 CCDC115Q96NT0 180 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 DCBLD2Q96PD2 775 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 BTBD9Q96Q07 612 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 DPH2Q9BQC3 489 aaPredicted RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 PDP1Q9P0J1 537 aaPredicted RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 PPP4R1LQ9P1A2 415 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 DKKL1Q9UK85 242 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 PPT2Q9UMR5 302 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 A0A0G2JPF8 293 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 A6NL46 340 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 EIF4E1BA6NMX2 242 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 HNRNPCL2B2RXH8 293 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 HNRNPCL3B7ZW38 293 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 FAM227AF5H4B4 570 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 CTSVO60911 334 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 CCNB2O95067 398 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 DBIP07108 87 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 HNRNPCL4P0DMR1 293 aa7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 IDH2P48735 452 aaKnown RBP7.78□□□□□ -1.16
GTF3C3-201ENST00000263956 KCNC4Q03721 635 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms