RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LSM11P83369 360 aaKnown RBP eCLIP14.4□□□□□ -0.111e-6■■■□□ 16.7
DDX56-201ENST00000258772 RUNX1T1Q06455 604 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 SYT14P1Q58G82 188 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 ZMAT1Q5H9K5 638 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 OR4C11Q6IEV9 310 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 ACSM5Q6NUN0 579 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 ADAMTSL4Q6UY14 1074 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 WASH2PQ6VEQ5 465 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 USP30Q70CQ3 517 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 OLIG3Q7RTU3 272 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 MMAAQ8IVH4 418 aaKnown RBP14.4□□□□□ -0.11
DDX56-201ENST00000258772 LAX1Q8IWV1 398 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 OR52I1Q8NGK6 324 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 RSPRY1Q96DX4 576 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 AMDHD1Q96NU7 426 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 WDFY2Q96P53 400 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 DPH7Q9BTV6 452 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 LGR4Q9BXB1 951 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 PITHD1Q9GZP4 211 aaPredicted RBP14.4□□□□□ -0.11
DDX56-201ENST00000258772 MAN2C1Q9NTJ4 1040 aa14.4□□□□□ -0.11
DDX56-201ENST00000258772 TESQ9UGI8 421 aaKnown RBP14.4□□□□□ -0.11
DDX56-201ENST00000258772 DENND4AQ7Z401 1863 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 EPPINO95925 133 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 PPP2R1BP30154 601 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 GPC1P35052 558 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 TGM4P49221 684 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 EFNB1P98172 346 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.114e-8■■■■□ 26.5
DDX56-201ENST00000258772 ZNF79Q15937 498 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 NDUFA9Q16795 377 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 FAM46CQ5VWP2 391 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 TP53I13Q8NBR0 393 aaPredicted RBP14.39□□□□□ -0.11
DDX56-201ENST00000258772 OR6T1Q8NGN1 323 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 ZNF486Q96H40 463 aaPredicted RBP14.39□□□□□ -0.11
DDX56-201ENST00000258772 LRR1Q96L50 414 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 GPA33Q99795 319 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 NEK6Q9HC98 313 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 ZCCHC3Q9NUD5 404 aaKnown RBP14.39□□□□□ -0.11
DDX56-201ENST00000258772 NPAP1Q9NZP6 1156 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 SLC9A8Q9Y2E8 581 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 PCDHGB2Q9Y5G2 931 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 DOCK9Q9BZ29 2069 aa14.39□□□□□ -0.11
DDX56-201ENST00000258772 COL4A3Q01955 1670 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 A0A0A6YYD5 115 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 IQCMA0A1B0GVH7 501 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 PLD2O14939 933 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 KIAA0355O15063 1070 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 RAB36O95755 333 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 EPHX1P07099 455 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 BMPR1AP36894 532 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ETV5P41161 510 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 HTR3AP46098 478 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ETV1P50549 477 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 CSNK1G2P78368 415 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 CDK5Q00535 292 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 LARS2Q15031 903 aaKnown RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 BAK1Q16611 211 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ZNF362Q5T0B9 420 aaPredicted RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 NDUFAF5Q5TEU4 345 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 C1orf94Q6P1W5 598 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 IQCHQ86VS3 1027 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 UBQLNLQ8IYU4 475 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 LINC00471Q8N535 108 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 MORN4Q8NDC4 146 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 PSD4Q8NDX1 1056 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 FGF11Q92914 225 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ZNF582Q96NG8 517 aaPredicted RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 NEDD4LQ96PU5 975 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 SLC35C2Q9NQQ7 365 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 TXNL4BQ9NX01 149 aaKnown RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 CDRT1O95170 752 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 LGI1O95970 557 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 SERPIND1P05546 499 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 DRD2P14416 443 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 VIPR2P41587 438 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 IFITM2Q01629 132 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 MXD1Q05195 221 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ZNF234Q14588 700 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 CCDC92Q53HC0 331 aaPredicted RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 RSBN1Q5VWQ0 802 aaPredicted RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 KIAA1211LQ6NV74 962 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ZNF544Q6NX49 715 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 SFTPA1Q8IWL2 248 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 LINC01555Q8NAE3 123 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 CREB3L4Q8TEY5 395 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 SLC25A46Q96AG3 418 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 OTUB1Q96FW1 271 aaPredicted RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 ZFYVE19Q96K21 471 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 C17orf62Q9BQA9 187 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 AICDAQ9GZX7 198 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 BCL2L10Q9HD36 194 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 ZSCAN32Q9NX65 697 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 DEC1Q9P2X7 70 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 MRPS23Q9Y3D9 190 aaKnown RBP14.38□□□□□ -0.11
DDX56-201ENST00000258772 GRIP1Q9Y3R0 1128 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 CMAHPQ9Y471 501 aa14.38□□□□□ -0.11
DDX56-201ENST00000258772 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
DDX56-201ENST00000258772 IL1AP01583 271 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms