RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 IRS1P35568 1242 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SLC30A8Q8IWU4 369 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 GALNT12Q8IXK2 581 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SLAIN1Q8ND83 568 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 ATP6V1C2Q8NEY4 427 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 OR4F15Q8NGB8 312 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 PIK3R3Q92569 461 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 C11orf24Q96F05 449 aaPredicted RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 FCRL4Q96PJ5 515 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 PLCXD1Q9NUJ7 323 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 PLEKHM1Q9Y4G2 1056 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SMLR1H3BR10 107 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 DDX5P17844 614 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 GABRB1P18505 474 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 MMP11P24347 488 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 APEX1P27695 318 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 BMPR1AP36894 532 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 RPL3P39023 403 aaKnown RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 PRKCDQ05655 676 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 KLHL12Q53G59 568 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 NDUFAF5Q5TEU4 345 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 PGBD2Q6P3X8 592 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 VN1R5Q7Z5H4 357 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 PGBD3Q8N328 593 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 TMEM145Q8NBT3 493 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 C9orf43Q8TAL5 461 aaPredicted RBP12.78□□□□□ -0.36
VHL-201ENST00000256474 TBC1D20Q96BZ9 403 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 TM4SF18Q96CE8 201 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 SIGLEC11Q96RL6 698 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 DPH7Q9BTV6 452 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 MND1Q9BWT6 205 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 PLA2G12AQ9BZM1 189 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 ZDHHC5Q9C0B5 715 aa12.78□□□□□ -0.36
VHL-201ENST00000256474 HEPACAM2A8MVW5 462 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 H3BQ06 376 aaPredicted RBP12.77□□□□□ -0.36
VHL-201ENST00000256474 HMGN4O00479 90 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 B4GALT2O60909 372 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 PTPN2P17706 415 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 MAN2A2P49641 1150 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 TRIQKQ629K1 86 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 SLC39A5Q6ZMH5 540 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 ASB18Q6ZVZ8 466 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 DPPA4Q7L190 304 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 NLRP8Q86W28 1048 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 ATCAYQ86WG3 371 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 C19orf18Q8NEA5 215 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 ZBED6CLQ96FA7 236 aaPredicted RBP12.77□□□□□ -0.36
VHL-201ENST00000256474 TXNDC15Q96J42 360 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 GPA33Q99795 319 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.36
VHL-201ENST00000256474 TBC1D24Q9ULP9 559 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 SLC9A8Q9Y2E8 581 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 MRPS7Q9Y2R9 242 aaKnown RBP12.77□□□□□ -0.36
VHL-201ENST00000256474 PPIL1Q9Y3C6 166 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 CMAHPQ9Y471 501 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 KCNE3Q9Y6H6 103 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 CSNK1G3Q9Y6M4 447 aa12.77□□□□□ -0.36
VHL-201ENST00000256474 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
VHL-201ENST00000256474 CTSAP10619 480 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 ADH5P11766 374 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 CEBPBP17676 345 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 SOX9P48436 509 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 WDR5P61964 334 aaKnown RBP12.77□□□□□ -0.37
VHL-201ENST00000256474 ZNF544Q6NX49 715 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 HSDL2Q6YN16 418 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 ZER1Q7Z7L7 766 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 KIAA1958Q8N8K9 716 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 IL17RDQ8NFM7 739 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 TEX47Q8TBZ9 253 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 MRGPRX3Q96LB0 322 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 LRRC3BQ96PB8 259 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 HHIPQ96QV1 700 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 RSPO3Q9BXY4 272 aaPredicted RBP12.77□□□□□ -0.37
VHL-201ENST00000256474 KLHL31Q9H511 634 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 ENOPH1Q9UHY7 261 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 PGRMC2O15173 223 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 CAPN5O15484 640 aaPredicted RBP12.77□□□□□ -0.37
VHL-201ENST00000256474 SERPINI2O75830 405 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 DDCP20711 480 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 EIF4HQ15056 248 aaKnown RBP12.77□□□□□ -0.37
VHL-201ENST00000256474 SNAP47Q5SQN1 464 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 GPR155Q7Z3F1 870 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 SMAP2Q8WU79 429 aaPredicted RBP12.77□□□□□ -0.37
VHL-201ENST00000256474 ZFPM2Q8WW38 1151 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 ASB15Q8WXK1 588 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 OR8D1Q8WZ84 308 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 UBE2E3Q969T4 207 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 RNFT2Q96EX2 444 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 FCRL1Q96LA6 429 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 SPATA9Q9BWV2 254 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 HDHD2Q9H0R4 259 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 TMEM245Q9H330 911 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 TMEM38AQ9H6F2 299 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 FZD3Q9NPG1 666 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 KLHL1Q9NR64 748 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 THSD1Q9NS62 852 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.37
VHL-201ENST00000256474 CACNA1CQ13936 2221 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms