RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 NLNQ9BYT8 704 aa12.76□□□□□ -0.37
COLGALT1-201ENST00000252599 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
COLGALT1-201ENST00000252599 CD84Q9UIB8 345 aa12.76□□□□□ -0.37
COLGALT1-201ENST00000252599 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
COLGALT1-201ENST00000252599 PCDHB9Q9Y5E1 797 aa12.76□□□□□ -0.37
COLGALT1-201ENST00000252599 KCNMB2Q9Y691 235 aa12.76□□□□□ -0.37
COLGALT1-201ENST00000252599 PPM1DO15297 605 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 PRAMEF12O95522 483 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 INHAP05111 366 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 ALDOCP09972 364 aaKnown RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 PPP2R1BP30154 601 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 OR5I1Q13606 314 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SMN1Q16637 294 aaKnown RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TTLL10Q6ZVT0 673 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 FAM46DQ8NEK8 389 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 RBP7Q96R05 134 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 ZNF350Q9GZX5 532 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SMOC2Q9H3U7 446 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SNX10Q9Y5X0 201 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SLX4Q8IY92 1834 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SCN7AQ01118 1682 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 A0A1W2PQL4 384 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 J3QW42 95 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SLC25A17O43808 307 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 CSTAP01040 98 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SLC10A2Q12908 348 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TRA2AQ13595 282 aaKnown RBP eCLIP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 ARL13AQ5H913 290 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 LRRC38Q5VT99 294 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 LAMTOR1Q6IAA8 161 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 NOTUMQ6P988 496 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 PLEKHH3Q7Z736 793 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TSPAN33Q86UF1 283 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 THOC6Q86W42 341 aaKnown RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 LIX1LQ8IVB5 337 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 FBXO15Q8NCQ5 510 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 OR4D6Q8NGJ1 314 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 EMID1Q96A84 441 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 C1GALT1C1Q96EU7 318 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 KLF2Q9Y5W3 355 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 HCN1O60741 890 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 DRD5P21918 477 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 GRIA4P48058 902 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 RFX2P48378 723 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 SUOXP51687 545 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 CTSCP53634 463 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TNFRSF9Q07011 255 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 FAM83EQ2M2I3 478 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 KLHL22Q53GT1 634 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 WSCD1Q658N2 575 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 HIST2H2AA3Q6FI13 130 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 TSPAN17Q96FV3 270 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 CYP2S1Q96SQ9 504 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 PCYT2Q99447 389 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 PRDM12Q9H4Q4 367 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 ZCCHC4Q9H5U6 513 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 IKZF3Q9UKT9 509 aa12.75□□□□□ -0.37
COLGALT1-201ENST00000252599 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 AGPAT2O15120 278 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 ZNF682O95780 498 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 RPLP2P05387 115 aaKnown RBP12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 RHOP08100 348 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 LMO2P25791 158 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 LIMK2P53671 638 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 COQ5Q5HYK3 327 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 BAIAP2L2Q6UXY1 529 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 ADHFE1Q8IWW8 467 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 PNPLA1Q8N8W4 532 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 SEMA6DQ8NFY4 1073 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 ACOT12Q8WYK0 555 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 DDOQ99489 341 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 KCNK12Q9HB15 430 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 CLEC5AQ9NY25 188 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 OR7A17O14581 309 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 CASKO14936 926 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 MBTPS2O43462 519 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 SNRNP70P08621 437 aaKnown RBP12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 GJA4P35212 333 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 SLC10A7Q0GE19 358 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 HNRNPA0Q13151 305 aaKnown RBP12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 HKDC1Q2TB90 917 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 FBXO47Q5MNV8 452 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 SLC35F1Q5T1Q4 408 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 TSTD2Q5T7W7 516 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 NAPEPLDQ6IQ20 393 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 MAMDC4Q6UXC1 1216 aa12.74□□□□□ -0.37
COLGALT1-201ENST00000252599 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms