RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HLA-DQB1P01920 261 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 CHRM5P08912 532 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 ADH5P11766 374 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 UQCRC1P31930 480 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 SDC2P34741 201 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 CTNNB1P35222 781 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 VASPP50552 380 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 FLYWCH1Q4VC44 716 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ESCO2Q56NI9 601 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 TMIGD1Q6UXZ0 262 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 TAGAPQ8N103 731 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 WDR48Q8TAF3 677 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ARRDC3Q96B67 414 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 WDR34Q96EX3 536 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ZBED6CLQ96FA7 236 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 ARPC5LQ9BPX5 153 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 TRAF4Q9BUZ4 470 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 SGPP1Q9BX95 441 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 TSSK6Q9BXA6 273 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 HDHD5Q9BXW7 423 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 OR51B5Q9H339 312 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 REEP4Q9H6H4 257 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 IL23AQ9NPF7 189 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 DIABLOQ9NR28 239 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 RBFOX1Q9NWB1 397 aaKnown RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 RPL36Q9Y3U8 105 aaKnown RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 HSPB11Q9Y547 144 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 CLCA3PQ9Y6N3 262 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 PIPSLA2A3N6 862 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 LEUTXA8MZ59 168 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 PRRT4C9JH25 899 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 SHOXO15266 292 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 PROM1O43490 865 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 KLHL18O94889 574 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 C1GALT1C1LP0DN25 315 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 OSMP13725 252 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ST8SIA6P61647 398 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ZNF763Q0D2J5 394 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 C1DQ13901 141 aaKnown RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 RNLSQ5VYX0 342 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 SPRED2Q7Z698 418 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 LRRC56Q8IYG6 542 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 NATD1Q8N6N6 113 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 DUSP18Q8NEJ0 188 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ANKK1Q8NFD2 765 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 GOT1L1Q8NHS2 421 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 RSPRY1Q96DX4 576 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 COQ7Q99807 217 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 TMEM121BQ9BXQ6 578 aaPredicted RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 C11orf49Q9H6J7 331 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 KCNN3Q9UGI6 736 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 MOSPD1Q9UJG1 213 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 YARS2Q9Y2Z4 477 aaKnown RBP17.93■□□□□ 0.46
SNX4-201ENST00000251775 DYRK1BQ9Y463 629 aa17.93■□□□□ 0.46
SNX4-201ENST00000251775 ZNF197O14709 1029 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 SLC9A3R1O14745 358 aaPredicted RBP17.92■□□□□ 0.46
SNX4-201ENST00000251775 MYL12BO14950 172 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 C6orf47O95873 294 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 PCBP3P57721 371 aaKnown RBP17.92■□□□□ 0.46
SNX4-201ENST00000251775 TAP2Q03519 686 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 ILKQ13418 452 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 MPEG1Q2M385 716 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 ZNF547Q8IVP9 402 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 OR9A1PQ8NGU1 263 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 CIDECQ96AQ7 238 aaPredicted RBP17.92■□□□□ 0.46
SNX4-201ENST00000251775 UPRTQ96BW1 309 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 KATNB1Q9BVA0 655 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 BHLHE41Q9C0J9 482 aaPredicted RBP17.92■□□□□ 0.46
SNX4-201ENST00000251775 ANKRA2Q9H9E1 313 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 DMRT3Q9NQL9 472 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 ING3Q9NXR8 418 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 TEKT2Q9UIF3 430 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 HEPACAM2A8MVW5 462 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 HCN1O60741 890 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 CPEP16870 476 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 PNLIPRP1P54315 467 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 LIM2P55344 173 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 C12orf73Q69YU5 71 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 RAET1GQ6H3X3 334 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 USP30Q70CQ3 517 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 AMIGO1Q86WK6 493 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 SYT14Q8NB59 555 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 NUS1Q96E22 293 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 MCUBQ9NWR8 336 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 NLKQ9UBE8 527 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 SLC23A1Q9UHI7 598 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 KCND3Q9UK17 655 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 RAB23Q9ULC3 237 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 MAP4K5Q9Y4K4 846 aa17.92■□□□□ 0.46
SNX4-201ENST00000251775 FOXE1O00358 373 aaPredicted RBP17.91■□□□□ 0.46
SNX4-201ENST00000251775 ADAP00813 363 aa17.91■□□□□ 0.46
SNX4-201ENST00000251775 SLC2A2P11168 524 aaPredicted RBP17.91■□□□□ 0.46
SNX4-201ENST00000251775 UBL4AP11441 157 aa17.91■□□□□ 0.46
SNX4-201ENST00000251775 NAT1P18440 290 aa17.91■□□□□ 0.46
SNX4-201ENST00000251775 GPR1P46091 355 aa17.91■□□□□ 0.46
SNX4-201ENST00000251775 AP2S1P53680 142 aaPredicted RBP17.91■□□□□ 0.46
SNX4-201ENST00000251775 CLDN20P56880 219 aa17.91■□□□□ 0.46
SNX4-201ENST00000251775 PRSS53Q2L4Q9 553 aa17.91■□□□□ 0.46
SNX4-201ENST00000251775 CEACAM20Q6UY09 585 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms