RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 DTX3Q8N9I9 347 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 OR6T1Q8NGN1 323 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ZCCHC10Q8TBK6 192 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ENKURQ8TC29 256 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 NEURL3Q96EH8 262 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 TMED9Q9BVK6 235 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 DPEP2Q9H4A9 486 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 WDR26Q9H7D7 661 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 FZD3Q9NPG1 666 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 TMEM221A6NGB7 291 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 MID1O15344 667 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 FGF19O95750 216 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 PTTG1O95997 202 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ACVR2AP27037 513 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SEC13P55735 322 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 PDE7AQ13946 482 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 SSX1Q16384 188 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 LRRC26Q2I0M4 334 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF311Q5JNZ3 666 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF517Q6ZMY9 492 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 HDDC3Q8N4P3 179 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 C7orf57Q8NEG2 295 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 GOT1L1Q8NHS2 421 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ZNF354BQ96LW1 612 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 TOX2Q96NM4 488 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 OPALINQ96PE5 141 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 BTBD2Q9BX70 525 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 MMP28Q9H239 520 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 NEK6Q9HC98 313 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 MRPS30Q9NP92 439 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 KLHL28Q9NXS3 571 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 MAFFQ9ULX9 164 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 PCDHGA3Q9Y5H0 932 aa11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 ARID1BQ8NFD5 2236 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-201ENST00000247833 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PLD2O14939 933 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SOD1P00441 154 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 EIF2S1P05198 315 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PGBD2Q6P3X8 592 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 B3GLCTQ6Y288 498 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PLEKHM3Q6ZWE6 761 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 GPR155Q7Z3F1 870 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 RAB43Q86YS6 212 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC30A8Q8IWU4 369 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 OR4D11Q8NGI4 311 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 RASSF5Q8WWW0 418 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 TRIM43Q96BQ3 446 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 OTUB2Q96DC9 234 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 HHIPL1Q96JK4 782 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC38A2Q96QD8 506 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SPATA5L1Q9BVQ7 753 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 TEX12Q9BXU0 123 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SLC35C2Q9NQQ7 365 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PAK6Q9NQU5 681 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 CCDC59Q9P031 241 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SEC14L4Q9UDX3 406 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 FTSJ1Q9UET6 329 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PLEKHM1Q9Y4G2 1056 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 KLK4Q9Y5K2 254 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 A0A1W2PP55 124 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 FAM25AB3EWG3 89 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 FAM25CB3EWG5 89 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 FAM25GB3EWG6 89 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 RFXAPO00287 272 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 KMOO15229 486 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 VEGFDO43915 354 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 TCEA1P23193 301 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 ANXA11P50995 505 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 ID2Q02363 134 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SF3B4Q15427 424 aaKnown RBP eCLIP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 TRIQKQ629K1 86 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 OR4C11Q6IEV9 310 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 OR14C36Q8NHC7 312 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 FAM46AQ96IP4 442 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 NEDD4LQ96PU5 975 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 GLIPR2Q9H4G4 154 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 CNOT2Q9NZN8 540 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 CCDC182A6NF36 153 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SNTNA6NMZ2 147 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 NTN1O95631 604 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 ADRA2AP08913 450 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 MMP11P24347 488 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 P2RY2P41231 377 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 KHKP50053 298 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 C21orf58P58505 322 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 PRKCDQ05655 676 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 DBPQ10586 325 aaPredicted RBP11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 LRRC32Q14392 662 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 ACSM5Q6NUN0 579 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 VITQ6UXI7 678 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 LINC00299Q6ZSB3 139 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 CPA6Q8N4T0 437 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 SYT14Q8NB59 555 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 C19orf18Q8NEA5 215 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 ADAMTS15Q8TE58 950 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 TMCO6Q96DC7 493 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 DEPDC7Q96QD5 511 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 NELL2Q99435 816 aa11.92□□□□□ -0.5
RAB3IP-201ENST00000247833 OR52A5Q9H2C5 316 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms