RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 CD8B2A6NJW9 211 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 C12orf71A8MTZ7 269 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 CD8BP10966 210 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 CST5P28325 142 aaPredicted RBP17.59■□□□□ 0.41
CHPF-201ENST00000243776 RPS5P46782 204 aaKnown RBP17.59■□□□□ 0.41
CHPF-201ENST00000243776 GIPRP48546 466 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 MAPK12P53778 367 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 FAPQ12884 760 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 MEDAGQ5VYS4 303 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 ZNF57Q68EA5 555 aaPredicted RBP17.59■□□□□ 0.41
CHPF-201ENST00000243776 AMER3Q8N944 861 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 OR4F15Q8NGB8 312 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 WDFY2Q96P53 400 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 MACROD1Q9BQ69 325 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 TMEM175Q9BSA9 504 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 FNDC11Q9BVV2 318 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 ANKRA2Q9H9E1 313 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 ACOXLQ9NUZ1 547 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 CNIH4Q9P003 139 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 FBXW2Q9UKT8 454 aa17.59■□□□□ 0.41
CHPF-201ENST00000243776 HMGN4O00479 90 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 CTSLP07711 333 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 BUD31P41223 144 aaPredicted RBP17.58■□□□□ 0.41
CHPF-201ENST00000243776 MAP2K3P46734 347 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 WSCD2Q2TBF2 565 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 HENMT1Q5T8I9 393 aaKnown RBP17.58■□□□□ 0.41
CHPF-201ENST00000243776 TMEM215Q68D42 235 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 NXPE4Q6UWF7 544 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 ASB18Q6ZVZ8 466 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 TREX2Q9BQ50 279 aaPredicted RBP17.58■□□□□ 0.41
CHPF-201ENST00000243776 SPG21Q9NZD8 308 aa17.58■□□□□ 0.41
CHPF-201ENST00000243776 SHISA3A0PJX4 238 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 ISM1B1AKI9 464 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 HRO43593 1189 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 INPP1P49441 399 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 ALDH6A1Q02252 535 aaKnown RBP17.58■□□□□ 0.4
CHPF-201ENST00000243776 ZNF791Q3KP31 576 aaPredicted RBP17.58■□□□□ 0.4
CHPF-201ENST00000243776 HOMEZQ8IX15 550 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 OR5H6Q8NGV6 325 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 UPRTQ96BW1 309 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 CLIP3Q96DZ5 547 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 SLC46A2Q9BY10 475 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 SERHL2Q9H4I8 314 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 SLA2Q9H6Q3 261 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 TRIM45Q9H8W5 580 aaPredicted RBP17.58■□□□□ 0.4
CHPF-201ENST00000243776 ZNF106Q9H2Y7 1883 aaKnown RBP17.58■□□□□ 0.4
CHPF-201ENST00000243776 A8MVJ9 347 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 FAM25AB3EWG3 89 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 FAM25CB3EWG5 89 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 FAM25GB3EWG6 89 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 PLPP1O14494 284 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 IL1AP01583 271 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 CELP19835 753 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 ENDOUP21128 410 aaKnown RBP17.58■□□□□ 0.4
CHPF-201ENST00000243776 ALAS2P22557 587 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 PSMB5P28074 263 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 CHRNEQ04844 493 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 KIAA1161Q6NSJ0 714 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 IL20RBQ6UXL0 311 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 GDPGP1Q6ZNW5 385 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 PCNPQ8WW12 178 aaKnown RBP17.58■□□□□ 0.4
CHPF-201ENST00000243776 HCFC1R1Q9NWW0 138 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 A4GNTQ9UNA3 340 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 MAPRE3Q9UPY8 281 aa17.58■□□□□ 0.4
CHPF-201ENST00000243776 CHD7Q9P2D1 2997 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 FAAHO00519 579 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 ZNF780AO75290 641 aaPredicted RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 ELFN1P0C7U0 828 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 NR2F6P10588 404 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 NR2F1P10589 423 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 EVI2BP34910 448 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 TMC8Q8IU68 726 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 RASGRP3Q8IV61 690 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 TIGD4Q8IY51 512 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 OR6T1Q8NGN1 323 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 CXorf40BQ96DE9 158 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 MSLNLQ96KJ4 702 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 TEX10Q9NXF1 929 aaPredicted RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 SLC30A4O14863 429 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 PLOD3O60568 738 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 PCSK2P16519 638 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 DDX5P17844 614 aaKnown RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 WNT4P56705 351 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 ZNF33BQ06732 778 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 RNASE12Q5GAN4 147 aaKnown RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 HTR3DQ70Z44 454 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 GDPD1Q8N9F7 314 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 TMEM145Q8NBT3 493 aa17.57■□□□□ 0.4
CHPF-201ENST00000243776 SENP5Q96HI0 755 aaPredicted RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 CPEB1Q9BZB8 566 aaKnown RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 CUEDC1Q9NWM3 386 aaPredicted RBP17.57■□□□□ 0.4
CHPF-201ENST00000243776 KPNA3O00505 521 aaPredicted RBP17.56■□□□□ 0.4
CHPF-201ENST00000243776 GRM6O15303 877 aa17.56■□□□□ 0.4
CHPF-201ENST00000243776 TEX28O15482 410 aa17.56■□□□□ 0.4
CHPF-201ENST00000243776 ALPPP05187 535 aa17.56■□□□□ 0.4
CHPF-201ENST00000243776 CPEP16870 476 aa17.56■□□□□ 0.4
CHPF-201ENST00000243776 ZNF750Q32MQ0 723 aa17.56■□□□□ 0.4
CHPF-201ENST00000243776 ZNF730Q6ZMV8 503 aa17.56■□□□□ 0.4
CHPF-201ENST00000243776 KIF18BQ86Y91 864 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms