RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ARSGQ96EG1 525 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 PHF21BQ96EK2 531 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 LRRC46Q96FV0 321 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 YIPF4Q9BSR8 244 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 ALOXE3Q9BYJ1 711 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 PELI2Q9HAT8 420 aa12.7□□□□□ -0.38
DDX39A-201ENST00000242776 CLK4Q9HAZ1 481 aaKnown RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 PTBP2Q9UKA9 531 aaKnown RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 PPIEQ9UNP9 301 aaKnown RBP12.7□□□□□ -0.38
DDX39A-201ENST00000242776 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 C17orf105B2RV13 164 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 EEF1E1-BLOC1S5C9J1V9 151 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 G3V2L1 256 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 EEF1E1O43324 174 aaKnown RBP12.69□□□□□ -0.38
DDX39A-201ENST00000242776 B3GALT2O43825 422 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 DLX3O60479 287 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 LDB3O75112 727 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 H2AFYO75367 372 aaKnown RBP12.69□□□□□ -0.38
DDX39A-201ENST00000242776 HEXAP06865 529 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 BPGMP07738 259 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 SERPINA6P08185 405 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 DHRS4L1P0CG22 281 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 CERS1P27544 350 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 PIK3CGP48736 1102 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 HSD17B7P56937 341 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 STXBP1P61764 594 aaKnown RBP12.69□□□□□ -0.38
DDX39A-201ENST00000242776 STX4Q12846 297 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 C18orf21Q32NC0 220 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-201ENST00000242776 TRIM42Q8IWZ5 723 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 KLHDC8AQ8IYD2 350 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 SLC2A12Q8TD20 617 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 GAL3ST3Q96A11 431 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 INTS9Q9NV88 658 aaKnown RBP12.69□□□□□ -0.38
DDX39A-201ENST00000242776 OXSMQ9NWU1 459 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 OPTCQ9UBM4 332 aa12.69□□□□□ -0.38
DDX39A-201ENST00000242776 MRPS33Q9Y291 106 aaKnown RBP12.69□□□□□ -0.38
DDX39A-201ENST00000242776 CLCA1A8K7I4 914 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 CCNT2O60583 730 aaKnown RBP12.68□□□□□ -0.38
DDX39A-201ENST00000242776 HCN1O60741 890 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 TRIM13O60858 407 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 STK16O75716 305 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 WDR47O94967 919 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 EPXP11678 715 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 CHN1P15882 459 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 ALDH3A1P30838 453 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 GGT5P36269 586 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 HSPA7P48741 367 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 DNAJB13P59910 316 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 HERVK_113P63132 956 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 MPP2Q14168 576 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 DAZAP2Q15038 168 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-201ENST00000242776 CFAP157Q5JU67 520 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 OPN5Q6U736 354 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 NUDCD3Q8IVD9 361 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 C10orf107Q8IVU9 208 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 GOLM1Q8NBJ4 401 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 FAM13CQ8NE31 585 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 DAZLQ92904 295 aaKnown RBP12.68□□□□□ -0.38
DDX39A-201ENST00000242776 MS4A6EQ96DS6 147 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 TMEM79Q9BSE2 394 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 ERVK-6Q9BXR3 956 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 CD244Q9BZW8 370 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF703Q9H7S9 590 aaPredicted RBP12.68□□□□□ -0.38
DDX39A-201ENST00000242776 PLEKHF2Q9H8W4 249 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 ANGPTL3Q9Y5C1 460 aa12.68□□□□□ -0.38
DDX39A-201ENST00000242776 H7C1Q1 480 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 K7EPI3 171 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 TAPBPO15533 448 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 ETHE1O95571 254 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 CD53P19397 219 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 IMPDH1P20839 514 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 PEX19P40855 299 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 GDF5P43026 501 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 SLC6A12P48065 614 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 LIM2P55344 173 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 SLBPQ14493 270 aaKnown RBP eCLIP12.67□□□□□ -0.38
DDX39A-201ENST00000242776 ACSF3Q4G176 576 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF678Q5SXM1 525 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 SLC22A10Q63ZE4 541 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 ADNP2Q6IQ32 1131 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 ZNF595Q8IYB9 648 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 FBXW8Q8N3Y1 598 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 MORN4Q8NDC4 146 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 OR14A16Q8NHC5 309 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 L3HYPDHQ96EM0 354 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 SGCZQ96LD1 299 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 TMEM237Q96Q45 408 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 MECRQ9BV79 373 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 C1QTNF3Q9BXJ4 246 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 CAPS2Q9BXY5 557 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 COPS7BQ9H9Q2 264 aaPredicted RBP12.67□□□□□ -0.38
DDX39A-201ENST00000242776 DNAJC11Q9NVH1 559 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 CAMK2AQ9UQM7 478 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 STK38LQ9Y2H1 464 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 DOCK7Q96N67 2140 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 CSPG4Q6UVK1 2322 aa12.67□□□□□ -0.38
DDX39A-201ENST00000242776 LRIT2A6NDA9 550 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 SH3BGRLO75368 114 aa12.66□□□□□ -0.38
DDX39A-201ENST00000242776 TRAPPC6AO75865 159 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms