RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ARGFXA6NJG6 315 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 PDE9AO76083 593 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 NPPAP01160 153 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCR4P51679 360 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 MTPNP58546 118 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 RCAN2Q14206 197 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 EXOSC7Q15024 291 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 FAM111BQ6SJ93 734 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 RNF130Q86XS8 419 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CACTIN-AS1Q8N1I8 211 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 FAM13CQ8NE31 585 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR2T12Q8NG77 320 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF285Q96NJ3 590 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 AMDHD1Q96NU7 426 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF160Q9HCG1 818 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 SIRT5Q9NXA8 310 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 TOR4AQ9NXH8 423 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 SCELO95171 688 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 DSTNP60981 165 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 TGIF1Q15583 401 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 FAM69BQ5VUD6 431 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 MRM1Q6IN84 353 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 ERICH5Q6P6B1 374 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 KIF2BQ8N4N8 673 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 TMCO5AQ8N6Q1 288 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR10A6Q8NH74 314 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC45A3Q96JT2 553 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 MS4A4EQ96PG1 132 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCNL2Q96S94 520 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCDC106Q9BWC9 280 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 TMEM184BQ9Y519 407 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 EYSQ5T1H1 3165 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 REV3LO60673 3130 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 WASHC1A8K0Z3 465 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 ZNF682O95780 498 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 PRR35P0CG20 571 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 SMIM10L1P0DMW3 83 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 MMP11P24347 488 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCL11P51671 97 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 NR0B1P51843 470 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 PLCXD2Q0VAA5 305 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 ATG14Q6ZNE5 492 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 KBTBD2Q8IY47 623 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 CDRT4Q8N9R6 151 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR5M3Q8NGP4 307 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 SMIM10Q96HG1 83 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 EPS8L2Q9H6S3 715 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 P4HTMQ9NXG6 502 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 P2RX2Q9UBL9 471 aa10.42□□□□□ -0.74
TNFAIP3-201ENST00000237289 TP53I11O14683 189 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 CREG1O75629 220 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 UNC5CO95185 931 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 CAPN3P20807 821 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 ME2P23368 584 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 GABRA4P48169 554 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 CRISP3P54108 245 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 POU6F2P78424 691 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 LTB4RQ15722 352 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 DEFB109BQ30KR1 87 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 LAPTM4BQ86VI4 370 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 DTNBP1Q96EV8 351 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 ADPRHL2Q9NX46 363 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 ACSL6Q9UKU0 697 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 CCL27Q9Y4X3 112 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 TTC36A6NLP5 189 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 NPIPB8E9PQR5 432 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 RAB40ALP0C0E4 278 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 HBA1P69905 142 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 NDUFAF7Q7L592 441 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 PLPP5Q8NEB5 264 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 ASB15Q8WXK1 588 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 RMND5BQ96G75 393 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 NSMCE2Q96MF7 247 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 INPP5KQ9BT40 448 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR10A5Q9H207 317 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 NECTIN3Q9NQS3 549 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 PGAM4Q8N0Y7 254 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 BMPERQ8N8U9 685 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 SLC38A9Q8NBW4 561 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 TM9SF4Q92544 642 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 AURKBQ96GD4 344 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 THOC3Q96J01 351 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 ACTRT3Q9BYD9 372 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 TBL1XR1Q9BZK7 514 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 B3GNT4Q9C0J1 378 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 SCN3AQ9NY46 2000 aa10.41□□□□□ -0.74
TNFAIP3-201ENST00000237289 UQCRBP14927 111 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 GCKP35557 465 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 STAT5AP42229 794 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 LANCL3Q6ZV70 420 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 TREML1Q86YW5 311 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 SCUBE1Q8IWY4 988 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 MORN4Q8NDC4 146 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 OR7G1Q8NGA0 311 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 PROX1Q92786 737 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 RAB8BQ92930 207 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 COQ8BQ96D53 544 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 KCMF1Q9P0J7 381 aa10.4□□□□□ -0.74
TNFAIP3-201ENST00000237289 RPS6KB2Q9UBS0 482 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms