RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 BVESQ8NE79 360 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 DNAJB3Q8WWF6 145 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 TMPRSS4Q9NRS4 437 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 HACL1Q9UJ83 578 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 BTBD17A6NE02 478 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 FAM170BA6NMN3 283 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CSO75390 466 aaKnown RBP12.29□□□□□ -0.44
VAMP4-201ENST00000236192 TSPAN15O95858 294 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 HAPLN1P10915 354 aaPredicted RBP12.29□□□□□ -0.44
VAMP4-201ENST00000236192 TBX4P57082 545 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 PRR5P85299 388 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 SP2Q02086 613 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 LRFN4Q6PJG9 635 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 SULT4A1Q9BR01 284 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 POTEKPQ9BYX7 375 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 PCDHGA9Q9Y5G4 932 aaKnown RBP12.29□□□□□ -0.44
VAMP4-201ENST00000236192 GLUD1P00367 558 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 GIMD1P0DJR0 217 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 HMGCLP35914 325 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 MTNR1AP48039 350 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CTAG1AP78358 180 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 SPP2Q13103 211 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CARD16Q5EG05 197 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 OVCH2Q7RTZ1 564 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 AVL9Q8NBF6 648 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 UBE2E3Q969T4 207 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 VRK1Q99986 396 aaPredicted RBP12.29□□□□□ -0.44
VAMP4-201ENST00000236192 ANKRD19PQ9H560 264 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 ABCC13Q9NSE7 274 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CKLFQ9UBR5 152 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 SCN2BO60939 215 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 EBLN1P0CF75 366 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 S100A10P60903 97 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 AADACL4Q5VUY2 407 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 LIX1LQ8IVB5 337 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CMTM7Q96FZ5 175 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 SMOC2Q9H3U7 446 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 KLK14Q9P0G3 267 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
VAMP4-201ENST00000236192 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
VAMP4-201ENST00000236192 CPSF4LA6NMK7 179 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 PIGRP01833 764 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ART1P52961 327 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CASP9P55211 416 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 MRPS10P82664 201 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 DSC2Q02487 901 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 TUSC3Q13454 348 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 TOMM20Q15388 145 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 HIST2H3PS2Q5TEC6 136 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 Q6ZPB1 254 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 UBE2R2Q712K3 238 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SERPINA11Q86U17 422 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 KIAA0319LQ8IZA0 1049 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SLC7A13Q8TCU3 470 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 NTAN1Q96AB6 310 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CAMK1GQ96NX5 476 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 FDXACB1Q9BRP7 624 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SYT4Q9H2B2 425 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 OR51V1Q9H2C8 321 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 OR51M1Q9H341 326 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 MRPS30Q9NP92 439 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 GPR182O15218 404 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SCGNO76038 276 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 HOXD4P09016 255 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 RFC3P40938 356 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 PRKAG1P54619 331 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ETFDHQ16134 617 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SIAH3Q8IW03 269 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SLC22A15Q8IZD6 547 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 IL31RAQ8NI17 732 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 RNF141Q8WVD5 230 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 HRH4Q9H3N8 390 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ADAM18Q9Y3Q7 739 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 A0A1B0GVC2 190 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 DDTLA6NHG4 134 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CASC3O15234 703 aaKnown RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 NCR1O76036 304 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-201ENST00000236192 FGBP02675 491 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 UCHL1P09936 223 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CPT2P23786 658 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CALCRP30988 508 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 GLP1RP43220 463 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 RHOAP61586 193 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 MBTD1Q05BQ5 628 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 C9orf152Q5JTZ5 239 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 C18orf63Q68DL7 685 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 C1orf94Q6P1W5 598 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 CEP68Q76N32 757 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ZNF227Q86WZ6 799 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 ARFGAP1Q8N6T3 406 aa12.28□□□□□ -0.44
VAMP4-201ENST00000236192 OR9Q2Q8NGE9 314 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms